Cow genome map

Conread name: Ss1.1-Pig3-SRG8010N20.5

Conread position: 508-632
Cow position: chr2:1638616-1638492 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 41

Conread position: 513-636
Cow position: chr2:6039020-6038894 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 514-626
Cow position: chr2:46971128-46971015 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 514-629
Cow position: chr2:22113692-22113809 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-630
Cow position: chr2:64131429-64131313 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-631
Cow position: chr2:32989763-32989876 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-631
Cow position: chr2:45311111-45311232 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 514-631
Cow position: chr2:77282027-77281911 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 514-632
Cow position: chr2:39815278-39815393 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 514-632
Cow position: chr2:69238285-69238163 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 514-635
Cow position: chr2:66563225-66563344 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr2:17328756-17328635 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 514-636
Cow position: chr2:26851171-26851049 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr2:38272158-38272279 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr2:38273556-38273431 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr2:39662711-39662587 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 514-636
Cow position: chr2:41622490-41622371 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 101

Conread position: 514-636
Cow position: chr2:44081443-44081321 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr2:44550835-44550952 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr2:45470013-45469895 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr2:55632782-55632664 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr2:55960605-55960725 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 32

Conread position: 514-636
Cow position: chr2:59397047-59397169 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 65

Conread position: 514-636
Cow position: chr2:60903150-60903028 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr2:65269684-65269804 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 514-636
Cow position: chr2:70945410-70945290 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 514-636
Cow position: chr2:80116105-80115986 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr2:81894335-81894457 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 30

Conread position: 515-628
Cow position: chr2:43857049-43856937 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 60

Conread position: 515-629
Cow position: chr2:31120039-31119927 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 515-632
Cow position: chr2:17967022-17967139 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr2:208024-207903 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr2:1210758-1210879 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 35

Conread position: 515-636
Cow position: chr2:13354681-13354562 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr2:36007581-36007699 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 515-636
Cow position: chr2:51098080-51098201 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr2:72527965-72527845 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 516-629
Cow position: chr2:17114724-17114839 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 516-631
Cow position: chr2:42255439-42255327 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 516-632
Cow position: chr2:21731-21845 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 516-632
Cow position: chr2:16514787-16514675 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr2:19137886-19138003 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 516-632
Cow position: chr2:46033339-46033222 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 516-632
Cow position: chr2:51594769-51594654 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 516-632
Cow position: chr2:51824929-51824814 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 516-636
Cow position: chr2:387772-387888 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 516-636
Cow position: chr2:23493541-23493424 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 516-636
Cow position: chr2:26170749-26170632 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 516-636
Cow position: chr2:33531945-33532065 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 38, 48

Conread position: 516-636
Cow position: chr2:39597970-39597849 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 516-636
Cow position: chr2:52385912-52386031 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 519-636
Cow position: chr2:25283116-25282999 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-626
Cow position: chr2:39419585-39419690 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-630
Cow position: chr2:55062886-55062778 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 520-631
Cow position: chr2:42293254-42293141 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr2:29734825-29734713 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr2:45912632-45912744 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:12051155-12051038 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 25

Conread position: 520-636
Cow position: chr2:15250182-15250067 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 80

Conread position: 520-636
Cow position: chr2:34535157-34535270 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 520-636
Cow position: chr2:36105269-36105153 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:41954886-41954770 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:45907275-45907165 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr2:46020905-46020792 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr2:66480186-66480302 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:70781094-70780983 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr2:78220099-78219983 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr2:80963646-80963760 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr2:81927854-81927740 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 521-632
Cow position: chr2:67927796-67927905 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 29

Conread position: 521-636
Cow position: chr2:1756040-1755921 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 521-636
Cow position: chr2:5998946-5998832 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 521-636
Cow position: chr2:11412598-11412483 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 521-636
Cow position: chr2:46184266-46184381 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr2:56102464-56102578 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 27

Conread position: 525-636
Cow position: chr2:6884220-6884110 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 525-636
Cow position: chr2:19294589-19294478 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 544-636
Cow position: chr2:4016861-4016953 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 544-636
Cow position: chr2:45439419-45439327 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 545-630
Cow position: chr2:60462843-60462928 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 545-630
Cow position: chr2:60468222-60468307 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 76
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 549-636
Cow position: chr2:28318881-28318967 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.