Cow genome map
Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
Conread position: | 54-290 |
Cow position: | chr21:41562964-41563198 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 175, 74 |
Conread position: | 510-636 |
Cow position: | chr21:27743822-27743696 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 510-636 |
Cow position: | chr21:41155938-41155812 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 45, 81 |
Conread position: | 512-636 |
Cow position: | chr21:47009164-47009287 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 513-636 |
Cow position: | chr21:36789865-36789744 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 106 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 31, 103 |
Conread position: | 514-626 |
Cow position: | chr21:40589415-40589526 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 89 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 514-630 |
Cow position: | chr21:45439167-45439284 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 514-631 |
Cow position: | chr21:29014841-29014959 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-632 |
Cow position: | chr21:27863444-27863562 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 98 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 29, 76 |
Conread position: | 514-635 |
Cow position: | chr21:40266194-40266074 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr21:3381009-3381134 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 44, 34 |
Conread position: | 514-636 |
Cow position: | chr21:6713456-6713576 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 41, 26 |
Conread position: | 514-636 |
Cow position: | chr21:10001144-10001024 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr21:10004816-10004938 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr21:15976702-15976584 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 514-636 |
Cow position: | chr21:17890371-17890252 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 514-636 |
Cow position: | chr21:22720297-22720176 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 514-636 |
Cow position: | chr21:24642590-24642469 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 514-636 |
Cow position: | chr21:28244540-28244418 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr21:28919454-28919575 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr21:32339671-32339788 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 514-636 |
Cow position: | chr21:38664708-38664586 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 67, 84 |
Conread position: | 514-636 |
Cow position: | chr21:42913674-42913796 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr21:47713935-47714054 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 514-636 |
Cow position: | chr21:47802190-47802309 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 45, 57 |
Conread position: | 515-635 |
Cow position: | chr21:9416318-9416198 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-635 |
Cow position: | chr21:43357186-43357308 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 65 |
Conread position: | 515-635 |
Cow position: | chr21:45867002-45866882 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-636 |
Cow position: | chr21:4399871-4399752 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 515-636 |
Cow position: | chr21:13840395-13840274 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-636 |
Cow position: | chr21:15584351-15584471 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 515-636 |
Cow position: | chr21:23980114-23980231 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 515-636 |
Cow position: | chr21:31676567-31676448 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 28, 43 |
Conread position: | 515-636 |
Cow position: | chr21:37789931-37790051 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 515-636 |
Cow position: | chr21:41621193-41621073 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 516-632 |
Cow position: | chr21:911899-912014 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 516-632 |
Cow position: | chr21:6102194-6102306 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 516-635 |
Cow position: | chr21:20418615-20418734 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 516-636 |
Cow position: | chr21:5612177-5612058 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 73 |
Conread position: | 516-636 |
Cow position: | chr21:8985619-8985496 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 40, 94 |
Conread position: | 516-636 |
Cow position: | chr21:15911470-15911348 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 516-636 |
Cow position: | chr21:30835433-30835312 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 516-636 |
Cow position: | chr21:38449378-38449498 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 516-636 |
Cow position: | chr21:47363669-47363790 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 103 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 517-636 |
Cow position: | chr21:28882203-28882084 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 99 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 519-636 |
Cow position: | chr21:10410288-10410169 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 99 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 519-636 |
Cow position: | chr21:14228503-14228621 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 520-629 |
Cow position: | chr21:36795666-36795556 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 520-630 |
Cow position: | chr21:34390912-34391020 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 520-631 |
Cow position: | chr21:30607024-30607135 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-631 |
Cow position: | chr21:41878534-41878425 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 520-632 |
Cow position: | chr21:12461904-12462017 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 520-636 |
Cow position: | chr21:868861-868976 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 520-636 |
Cow position: | chr21:6998003-6997889 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 520-636 |
Cow position: | chr21:7391214-7391327 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 520-636 |
Cow position: | chr21:8235492-8235605 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-636 |
Cow position: | chr21:13898251-13898134 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 520-636 |
Cow position: | chr21:14760637-14760523 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 92 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 520-636 |
Cow position: | chr21:18790498-18790610 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 520-636 |
Cow position: | chr21:33359971-33360084 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-636 |
Cow position: | chr21:39401658-39401543 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 14, 29 |
Conread position: | 521-632 |
Cow position: | chr21:19060028-19060134 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 521-632 |
Cow position: | chr21:20925441-20925553 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 89 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 522-632 |
Cow position: | chr21:957734-957626 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 522-636 |
Cow position: | chr21:20153017-20152903 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 97 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 522-636 |
Cow position: | chr21:23586943-23586829 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 89 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 523-632 |
Cow position: | chr21:18495030-18494922 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.