Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
| Conread position: | 513-636 |
| Cow position: | chr23:38455170-38455294 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 514-620 |
| Cow position: | chr23:29069433-29069539 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-631 |
| Cow position: | chr23:10853063-10852944 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 514-635 |
| Cow position: | chr23:16582902-16583020 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:1398031-1398147 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:1647626-1647506 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:1921219-1921338 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:6720273-6720395 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:9713330-9713207 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:15710065-15710185 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:16700034-16700151 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:22804732-22804613 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:23114040-23113919 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:33711768-33711649 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:36309430-36309308 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-636 |
| Cow position: | chr23:37065857-37065730 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 515-625 |
| Cow position: | chr23:25675693-25675801 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 515-632 |
| Cow position: | chr23:4445711-4445827 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 515-636 |
| Cow position: | chr23:187185-187065 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 515-636 |
| Cow position: | chr23:3244907-3245028 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 515-636 |
| Cow position: | chr23:33622143-33622263 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 516-629 |
| Cow position: | chr23:7845299-7845187 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 516-636 |
| Cow position: | chr23:349717-349837 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 516-636 |
| Cow position: | chr23:5162439-5162315 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 520-629 |
| Cow position: | chr23:2501852-2501959 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 520-630 |
| Cow position: | chr23:1923835-1923943 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 520-630 |
| Cow position: | chr23:38208728-38208619 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 520-632 |
| Cow position: | chr23:1655896-1655786 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 520-632 |
| Cow position: | chr23:14164396-14164510 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:1670904-1670789 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:1742359-1742244 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 520-636 |
| Cow position: | chr23:5723547-5723432 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:10014542-10014426 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:13599344-13599232 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:18296810-18296696 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:33601525-33601640 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:38854733-38854849 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 520-636 |
| Cow position: | chr23:38973852-38973734 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 521-630 |
| Cow position: | chr23:3208618-3208726 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 523-636 |
| Cow position: | chr23:4329676-4329794 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 525-636 |
| Cow position: | chr23:5436646-5436753 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 545-636 |
| Cow position: | chr23:3247562-3247472 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.