Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
| Conread position: | 460-636 |
| Cow position: | chr24:7917326-7917501 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 510-636 |
| Cow position: | chr24:17567370-17567247 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 514-631 |
| Cow position: | chr24:16625505-16625622 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-632 |
| Cow position: | chr24:42007721-42007605 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 514-636 |
| Cow position: | chr24:10125855-10125733 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-636 |
| Cow position: | chr24:15861617-15861739 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 514-636 |
| Cow position: | chr24:16645339-16645462 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 514-636 |
| Cow position: | chr24:27290852-27290732 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 514-636 |
| Cow position: | chr24:30483967-30484089 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 514-636 |
| Cow position: | chr24:31382882-31382758 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 514-636 |
| Cow position: | chr24:36554852-36554974 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 514-636 |
| Cow position: | chr24:40130109-40129988 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 515-636 |
| Cow position: | chr24:7913986-7913865 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 515-636 |
| Cow position: | chr24:15707462-15707579 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 516-631 |
| Cow position: | chr24:24457271-24457379 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 516-632 |
| Cow position: | chr24:18485015-18485132 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 516-636 |
| Cow position: | chr24:885709-885826 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 516-636 |
| Cow position: | chr24:16509949-16509832 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 516-636 |
| Cow position: | chr24:27052515-27052633 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 520-631 |
| Cow position: | chr24:35576560-35576668 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 520-632 |
| Cow position: | chr24:20943143-20943032 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 520-632 |
| Cow position: | chr24:27149374-27149261 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 520-636 |
| Cow position: | chr24:18695594-18695481 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 520-636 |
| Cow position: | chr24:18970534-18970646 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 520-636 |
| Cow position: | chr24:29673497-29673381 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 520-636 |
| Cow position: | chr24:32054636-32054521 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 520-636 |
| Cow position: | chr24:40850137-40850025 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 520-636 |
| Cow position: | chr24:43364336-43364221 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 521-636 |
| Cow position: | chr24:29707820-29707936 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 523-631 |
| Cow position: | chr24:32204822-32204928 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 524-632 |
| Cow position: | chr24:35074065-35073958 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 524-636 |
| Cow position: | chr24:32070934-32070827 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 20 |
| Conread position: | 542-636 |
| Cow position: | chr24:44041055-44041150 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 544-636 |
| Cow position: | chr24:17955489-17955580 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 559-636 |
| Cow position: | chr24:38347623-38347546 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 71 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.