Cow genome map

Conread name: Ss1.1-Pig3-SRG8010N20.5

Conread position: 48-290
Cow position: chr28:5344357-5344117 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 173, 83

Conread position: 48-290
Cow position: chr28:23056148-23056389 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 173, 80

Conread position: 514-627
Cow position: chr28:19222141-19222250 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 514-628
Cow position: chr28:5931366-5931252 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 32

Conread position: 514-630
Cow position: chr28:21355241-21355120 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 514-631
Cow position: chr28:4022398-4022281 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr28:15601287-15601170 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 25

Conread position: 514-632
Cow position: chr28:16252846-16252965 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 514-632
Cow position: chr28:22739802-22739687 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 514-635
Cow position: chr28:5144511-5144625 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-635
Cow position: chr28:7590171-7590289 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr28:118040-118161 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 514-636
Cow position: chr28:2752484-2752603 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 514-636
Cow position: chr28:3011259-3011382 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 514-636
Cow position: chr28:3078671-3078790 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr28:4307887-4308014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 514-636
Cow position: chr28:5166778-5166657 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 514-636
Cow position: chr28:7542072-7542194 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 54

Conread position: 514-636
Cow position: chr28:7644464-7644339 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr28:9099946-9099827 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr28:10053319-10053442 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 514-636
Cow position: chr28:10606615-10606737 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr28:19394629-19394509 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 514-636
Cow position: chr28:21502402-21502287 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 514-636
Cow position: chr28:23410315-23410434 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr28:23447814-23447932 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr28:27218333-27218215 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr28:28903653-28903777 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 515-635
Cow position: chr28:7512574-7512695 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 515-636
Cow position: chr28:3484591-3484468 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 515-636
Cow position: chr28:10057578-10057698 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 515-636
Cow position: chr28:12363148-12363270 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 515-636
Cow position: chr28:15263705-15263826 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr28:23840213-23840092 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 35

Conread position: 516-628
Cow position: chr28:33163452-33163565 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-631
Cow position: chr28:10745222-10745108 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 516-632
Cow position: chr28:21598244-21598359 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-635
Cow position: chr28:13607897-13607777 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 39

Conread position: 519-636
Cow position: chr28:26982733-26982847 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 23

Conread position: 520-632
Cow position: chr28:5838543-5838435 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr28:7697974-7698085 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr28:9285366-9285479 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-632
Cow position: chr28:21363751-21363640 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-636
Cow position: chr28:9390359-9390473 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 520-636
Cow position: chr28:16085329-16085215 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr28:20313281-20313166 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 29

Conread position: 520-636
Cow position: chr28:21380885-21380769 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr28:25728203-25728090 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-636
Cow position: chr28:25806577-25806463 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 520-636
Cow position: chr28:34877963-34878079 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 521-636
Cow position: chr28:5552935-5553052 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 521-636
Cow position: chr28:18370002-18370117 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 522-636
Cow position: chr28:19024147-19024032 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 86

Conread position: 540-636
Cow position: chr28:3105234-3105141 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 546-636
Cow position: chr28:4881257-4881347 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 11

Conread position: 546-636
Cow position: chr28:30746748-30746837 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.