Cow genome map
Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
Conread position: | 48-290 |
Cow position: | chr28:5344357-5344117 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 173, 83 |
Conread position: | 48-290 |
Cow position: | chr28:23056148-23056389 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 173, 80 |
Conread position: | 514-627 |
Cow position: | chr28:19222141-19222250 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 514-628 |
Cow position: | chr28:5931366-5931252 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 48, 32 |
Conread position: | 514-630 |
Cow position: | chr28:21355241-21355120 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 514-631 |
Cow position: | chr28:4022398-4022281 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-632 |
Cow position: | chr28:15601287-15601170 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 38, 25 |
Conread position: | 514-632 |
Cow position: | chr28:16252846-16252965 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 514-632 |
Cow position: | chr28:22739802-22739687 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 514-635 |
Cow position: | chr28:5144511-5144625 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-635 |
Cow position: | chr28:7590171-7590289 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr28:118040-118161 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 514-636 |
Cow position: | chr28:2752484-2752603 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 514-636 |
Cow position: | chr28:3011259-3011382 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 514-636 |
Cow position: | chr28:3078671-3078790 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr28:4307887-4308014 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 514-636 |
Cow position: | chr28:5166778-5166657 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 514-636 |
Cow position: | chr28:7542072-7542194 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 95, 54 |
Conread position: | 514-636 |
Cow position: | chr28:7644464-7644339 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 514-636 |
Cow position: | chr28:9099946-9099827 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-636 |
Cow position: | chr28:10053319-10053442 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 514-636 |
Cow position: | chr28:10606615-10606737 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr28:19394629-19394509 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 514-636 |
Cow position: | chr28:21502402-21502287 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 514-636 |
Cow position: | chr28:23410315-23410434 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 514-636 |
Cow position: | chr28:23447814-23447932 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-636 |
Cow position: | chr28:27218333-27218215 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 514-636 |
Cow position: | chr28:28903653-28903777 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 105 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 515-635 |
Cow position: | chr28:7512574-7512695 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 515-636 |
Cow position: | chr28:3484591-3484468 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 515-636 |
Cow position: | chr28:10057578-10057698 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 515-636 |
Cow position: | chr28:12363148-12363270 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 515-636 |
Cow position: | chr28:15263705-15263826 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-636 |
Cow position: | chr28:23840213-23840092 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 28, 35 |
Conread position: | 516-628 |
Cow position: | chr28:33163452-33163565 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 516-631 |
Cow position: | chr28:10745222-10745108 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 516-632 |
Cow position: | chr28:21598244-21598359 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 91 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 516-635 |
Cow position: | chr28:13607897-13607777 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 28, 39 |
Conread position: | 519-636 |
Cow position: | chr28:26982733-26982847 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 100 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 115, 23 |
Conread position: | 520-632 |
Cow position: | chr28:5838543-5838435 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 520-632 |
Cow position: | chr28:7697974-7698085 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 520-632 |
Cow position: | chr28:9285366-9285479 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-632 |
Cow position: | chr28:21363751-21363640 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 520-636 |
Cow position: | chr28:9390359-9390473 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 520-636 |
Cow position: | chr28:16085329-16085215 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-636 |
Cow position: | chr28:20313281-20313166 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 98 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 61, 29 |
Conread position: | 520-636 |
Cow position: | chr28:21380885-21380769 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-636 |
Cow position: | chr28:25728203-25728090 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 520-636 |
Cow position: | chr28:25806577-25806463 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 520-636 |
Cow position: | chr28:34877963-34878079 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 90 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 521-636 |
Cow position: | chr28:5552935-5553052 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 521-636 |
Cow position: | chr28:18370002-18370117 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 522-636 |
Cow position: | chr28:19024147-19024032 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 86 |
Conread position: | 540-636 |
Cow position: | chr28:3105234-3105141 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 84 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 546-636 |
Cow position: | chr28:4881257-4881347 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 80 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 86, 11 |
Conread position: | 546-636 |
Cow position: | chr28:30746748-30746837 (view UCSC Genome Browser custom track) |
Alignm length: | 91 |
Alignm identity: | 78 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.