Cow genome map

Conread name: Ss1.1-Pig3-SRG8010N20.5

Conread position: 506-636
Cow position: chr3:4087170-4087302 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 510-636
Cow position: chr3:71231381-71231258 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 36

Conread position: 514-630
Cow position: chr3:27696997-27697109 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 514-630
Cow position: chr3:57553867-57553983 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 29

Conread position: 514-630
Cow position: chr3:75687456-75687570 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-631
Cow position: chr3:71430223-71430340 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 44

Conread position: 514-632
Cow position: chr3:30701291-30701172 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 514-632
Cow position: chr3:43727060-43726943 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 514-632
Cow position: chr3:53739204-53739320 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-634
Cow position: chr3:52863203-52863320 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 514-635
Cow position: chr3:27544353-27544469 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:1517531-1517652 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 34

Conread position: 514-636
Cow position: chr3:2392981-2393101 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr3:2675010-2674890 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr3:3062549-3062425 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr3:5097188-5097068 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:5365658-5365539 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:17952639-17952518 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr3:37041400-37041276 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr3:39328381-39328257 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:44101949-44101833 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 514-636
Cow position: chr3:48241599-48241478 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 514-636
Cow position: chr3:55318919-55319040 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 514-636
Cow position: chr3:55970488-55970368 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:59271524-59271402 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 45

Conread position: 514-636
Cow position: chr3:61024320-61024441 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 30

Conread position: 514-636
Cow position: chr3:63860908-63861029 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 514-636
Cow position: chr3:67520188-67520310 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr3:68587004-68586882 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr3:72676072-72675954 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:73820388-73820508 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 12

Conread position: 514-636
Cow position: chr3:74500224-74500100 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 35

Conread position: 514-636
Cow position: chr3:76169303-76169423 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr3:76267994-76268117 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr3:79292810-79292692 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 515-622
Cow position: chr3:59000772-59000876 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 515-631
Cow position: chr3:15954105-15954220 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 515-631
Cow position: chr3:32184038-32184154 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 51

Conread position: 515-632
Cow position: chr3:47417583-47417700 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr3:15859686-15859805 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 515-636
Cow position: chr3:18067121-18066997 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 34

Conread position: 515-636
Cow position: chr3:33698711-33698591 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 515-636
Cow position: chr3:61539786-61539665 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr3:66900753-66900874 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 79

Conread position: 515-636
Cow position: chr3:83797854-83797973 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 516-620
Cow position: chr3:78945852-78945957 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 516-632
Cow position: chr3:8061108-8060993 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 60

Conread position: 516-632
Cow position: chr3:15051969-15052086 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 516-632
Cow position: chr3:46541850-46541962 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 516-636
Cow position: chr3:49650367-49650248 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 49

Conread position: 516-636
Cow position: chr3:50614620-50614499 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 516-636
Cow position: chr3:80953627-80953508 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 31

Conread position: 518-632
Cow position: chr3:67704523-67704408 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 520-630
Cow position: chr3:34937822-34937711 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 23

Conread position: 520-631
Cow position: chr3:49731664-49731774 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr3:25060055-25059944 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 520-632
Cow position: chr3:27212339-27212227 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 520-632
Cow position: chr3:66609867-66609977 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 520-634
Cow position: chr3:84000588-84000477 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-635
Cow position: chr3:70334720-70334832 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 520-636
Cow position: chr3:1534641-1534758 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr3:3985302-3985189 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 520-636
Cow position: chr3:11711940-11711823 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr3:12711940-12712056 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr3:30180060-30179943 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 520-636
Cow position: chr3:39171505-39171621 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr3:59884094-59884210 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 520-636
Cow position: chr3:63269198-63269084 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr3:73395092-73394983 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 520-636
Cow position: chr3:74878614-74878727 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 520-636
Cow position: chr3:76713345-76713462 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 31

Conread position: 520-636
Cow position: chr3:78894350-78894461 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 521-630
Cow position: chr3:26739440-26739549 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 34

Conread position: 521-636
Cow position: chr3:55434307-55434192 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 45

Conread position: 522-636
Cow position: chr3:65969140-65969023 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 523-631
Cow position: chr3:84175851-84175959 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 524-636
Cow position: chr3:4050167-4050056 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 524-636
Cow position: chr3:53113146-53113035 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 526-632
Cow position: chr3:75158331-75158225 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 539-632
Cow position: chr3:18056400-18056309 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 544-636
Cow position: chr3:38691453-38691545 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 547-636
Cow position: chr3:2506526-2506614 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 79
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 557-636
Cow position: chr3:3638128-3638049 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 72
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 557-636
Cow position: chr3:22872106-22872185 (view UCSC Genome Browser custom track)
Alignm length: 80
Alignm identity: 72
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.