Cow genome map
Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
Conread position: | 506-636 |
Cow position: | chr3:4087170-4087302 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 510-636 |
Cow position: | chr3:71231381-71231258 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 117, 36 |
Conread position: | 514-630 |
Cow position: | chr3:27696997-27697109 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-630 |
Cow position: | chr3:57553867-57553983 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 39, 29 |
Conread position: | 514-630 |
Cow position: | chr3:75687456-75687570 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 514-631 |
Cow position: | chr3:71430223-71430340 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 34, 44 |
Conread position: | 514-632 |
Cow position: | chr3:30701291-30701172 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 514-632 |
Cow position: | chr3:43727060-43726943 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 514-632 |
Cow position: | chr3:53739204-53739320 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-634 |
Cow position: | chr3:52863203-52863320 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 514-635 |
Cow position: | chr3:27544353-27544469 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr3:1517531-1517652 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 95, 34 |
Conread position: | 514-636 |
Cow position: | chr3:2392981-2393101 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 514-636 |
Cow position: | chr3:2675010-2674890 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 514-636 |
Cow position: | chr3:3062549-3062425 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 103 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-636 |
Cow position: | chr3:5097188-5097068 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 106 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr3:5365658-5365539 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr3:17952639-17952518 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr3:37041400-37041276 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 96 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 514-636 |
Cow position: | chr3:39328381-39328257 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 514-636 |
Cow position: | chr3:44101949-44101833 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 514-636 |
Cow position: | chr3:48241599-48241478 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 102 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 514-636 |
Cow position: | chr3:55318919-55319040 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 514-636 |
Cow position: | chr3:55970488-55970368 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 514-636 |
Cow position: | chr3:59271524-59271402 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 101 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 30, 45 |
Conread position: | 514-636 |
Cow position: | chr3:61024320-61024441 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 37, 30 |
Conread position: | 514-636 |
Cow position: | chr3:63860908-63861029 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 514-636 |
Cow position: | chr3:67520188-67520310 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr3:68587004-68586882 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr3:72676072-72675954 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 514-636 |
Cow position: | chr3:73820388-73820508 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 38, 12 |
Conread position: | 514-636 |
Cow position: | chr3:74500224-74500100 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 43, 35 |
Conread position: | 514-636 |
Cow position: | chr3:76169303-76169423 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 514-636 |
Cow position: | chr3:76267994-76268117 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 514-636 |
Cow position: | chr3:79292810-79292692 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 515-622 |
Cow position: | chr3:59000772-59000876 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 515-631 |
Cow position: | chr3:15954105-15954220 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 515-631 |
Cow position: | chr3:32184038-32184154 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 38, 51 |
Conread position: | 515-632 |
Cow position: | chr3:47417583-47417700 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-636 |
Cow position: | chr3:15859686-15859805 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 515-636 |
Cow position: | chr3:18067121-18066997 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 45, 34 |
Conread position: | 515-636 |
Cow position: | chr3:33698711-33698591 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 515-636 |
Cow position: | chr3:61539786-61539665 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-636 |
Cow position: | chr3:66900753-66900874 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 79 |
Conread position: | 515-636 |
Cow position: | chr3:83797854-83797973 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 516-620 |
Cow position: | chr3:78945852-78945957 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 87 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 516-632 |
Cow position: | chr3:8061108-8060993 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 35, 60 |
Conread position: | 516-632 |
Cow position: | chr3:15051969-15052086 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 516-632 |
Cow position: | chr3:46541850-46541962 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 516-636 |
Cow position: | chr3:49650367-49650248 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 39, 49 |
Conread position: | 516-636 |
Cow position: | chr3:50614620-50614499 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 516-636 |
Cow position: | chr3:80953627-80953508 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 43, 31 |
Conread position: | 518-632 |
Cow position: | chr3:67704523-67704408 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 520-630 |
Cow position: | chr3:34937822-34937711 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 95 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 31, 23 |
Conread position: | 520-631 |
Cow position: | chr3:49731664-49731774 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 91 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 520-632 |
Cow position: | chr3:25060055-25059944 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 520-632 |
Cow position: | chr3:27212339-27212227 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-632 |
Cow position: | chr3:66609867-66609977 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-634 |
Cow position: | chr3:84000588-84000477 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 92 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 520-635 |
Cow position: | chr3:70334720-70334832 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 520-636 |
Cow position: | chr3:1534641-1534758 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 520-636 |
Cow position: | chr3:3985302-3985189 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 520-636 |
Cow position: | chr3:11711940-11711823 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 520-636 |
Cow position: | chr3:12711940-12712056 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-636 |
Cow position: | chr3:30180060-30179943 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 520-636 |
Cow position: | chr3:39171505-39171621 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-636 |
Cow position: | chr3:59884094-59884210 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-636 |
Cow position: | chr3:63269198-63269084 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 520-636 |
Cow position: | chr3:73395092-73394983 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 520-636 |
Cow position: | chr3:74878614-74878727 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 520-636 |
Cow position: | chr3:76713345-76713462 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 14, 31 |
Conread position: | 520-636 |
Cow position: | chr3:78894350-78894461 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 521-630 |
Cow position: | chr3:26739440-26739549 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 34 |
Conread position: | 521-636 |
Cow position: | chr3:55434307-55434192 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 23, 45 |
Conread position: | 522-636 |
Cow position: | chr3:65969140-65969023 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 523-631 |
Cow position: | chr3:84175851-84175959 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 87 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 524-636 |
Cow position: | chr3:4050167-4050056 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 524-636 |
Cow position: | chr3:53113146-53113035 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 526-632 |
Cow position: | chr3:75158331-75158225 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 86 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 539-632 |
Cow position: | chr3:18056400-18056309 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 81 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 544-636 |
Cow position: | chr3:38691453-38691545 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 82 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 547-636 |
Cow position: | chr3:2506526-2506614 (view UCSC Genome Browser custom track) |
Alignm length: | 90 |
Alignm identity: | 79 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 557-636 |
Cow position: | chr3:3638128-3638049 (view UCSC Genome Browser custom track) |
Alignm length: | 80 |
Alignm identity: | 72 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 557-636 |
Cow position: | chr3:22872106-22872185 (view UCSC Genome Browser custom track) |
Alignm length: | 80 |
Alignm identity: | 72 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.