Cow genome map

Conread name: Ss1.1-Pig3-SRG8010N20.5

Conread position: 48-290
Cow position: chr9:7445018-7445272 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 166

Conread position: 474-636
Cow position: chr9:21030292-21030452 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 46

Conread position: 510-636
Cow position: chr9:33697048-33697172 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 513-632
Cow position: chr9:11319611-11319494 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 514-630
Cow position: chr9:39681363-39681477 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 514-631
Cow position: chr9:31638619-31638503 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 514-631
Cow position: chr9:51566471-51566356 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 514-631
Cow position: chr9:63745834-63745949 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr9:11123461-11123343 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 514-632
Cow position: chr9:31270804-31270919 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-632
Cow position: chr9:37000037-36999922 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-632
Cow position: chr9:41283039-41283153 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr9:5531969-5532091 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr9:6840017-6840145 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 514-636
Cow position: chr9:8534666-8534547 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 514-636
Cow position: chr9:8901203-8901079 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 514-636
Cow position: chr9:8998373-8998500 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 514-636
Cow position: chr9:10092370-10092249 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 514-636
Cow position: chr9:11377920-11377799 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 514-636
Cow position: chr9:15805899-15805782 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 52

Conread position: 514-636
Cow position: chr9:18002930-18002808 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 105
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 514-636
Cow position: chr9:22152062-22151939 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr9:22443603-22443484 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 514-636
Cow position: chr9:27279333-27279452 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 514-636
Cow position: chr9:29185113-29184989 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chr9:34000596-34000480 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 514-636
Cow position: chr9:35105766-35105647 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 514-636
Cow position: chr9:35375449-35375572 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 39

Conread position: 514-636
Cow position: chr9:49764681-49764800 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 514-636
Cow position: chr9:52407188-52407310 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr9:1756120-1756001 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 516-632
Cow position: chr9:5500879-5500997 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 516-636
Cow position: chr9:1997163-1997283 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 88

Conread position: 516-636
Cow position: chr9:10819805-10819689 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 520-629
Cow position: chr9:29035006-29034894 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 520-631
Cow position: chr9:33114375-33114485 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 520-631
Cow position: chr9:43871005-43871117 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 520-632
Cow position: chr9:1952240-1952129 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 24

Conread position: 520-632
Cow position: chr9:38343917-38344030 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 520-634
Cow position: chr9:32676707-32676821 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 29

Conread position: 520-635
Cow position: chr9:51720870-51720760 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 520-636
Cow position: chr9:1972972-1973085 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr9:6225425-6225310 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 520-636
Cow position: chr9:11168760-11168873 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 520-636
Cow position: chr9:21888198-21888310 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 520-636
Cow position: chr9:35306088-35305973 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 114, 29

Conread position: 520-636
Cow position: chr9:42445953-42445836 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 520-636
Cow position: chr9:47906251-47906137 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 69

Conread position: 520-636
Cow position: chr9:50543396-50543279 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 520-636
Cow position: chr9:50667451-50667567 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 29

Conread position: 521-632
Cow position: chr9:11969217-11969327 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 521-636
Cow position: chr9:29091823-29091938 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 524-636
Cow position: chr9:26390802-26390911 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 530-636
Cow position: chr9:7409816-7409921 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 530-636
Cow position: chr9:42998431-42998324 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 543-630
Cow position: chr9:1520687-1520600 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 545-632
Cow position: chr9:41995762-41995849 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.