Cow genome map
Conread name: | Ss1.1-Pig3-SRG8010N20.5 |
Conread position: | 48-290 |
Cow position: | chr9:7445018-7445272 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 77, 166 |
Conread position: | 474-636 |
Cow position: | chr9:21030292-21030452 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 7, 46 |
Conread position: | 510-636 |
Cow position: | chr9:33697048-33697172 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 513-632 |
Cow position: | chr9:11319611-11319494 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 98 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 514-630 |
Cow position: | chr9:39681363-39681477 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-631 |
Cow position: | chr9:31638619-31638503 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-631 |
Cow position: | chr9:51566471-51566356 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 96 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 514-631 |
Cow position: | chr9:63745834-63745949 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-632 |
Cow position: | chr9:11123461-11123343 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-632 |
Cow position: | chr9:31270804-31270919 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-632 |
Cow position: | chr9:37000037-36999922 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-632 |
Cow position: | chr9:41283039-41283153 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr9:5531969-5532091 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr9:6840017-6840145 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 514-636 |
Cow position: | chr9:8534666-8534547 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 514-636 |
Cow position: | chr9:8901203-8901079 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 514-636 |
Cow position: | chr9:8998373-8998500 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 514-636 |
Cow position: | chr9:10092370-10092249 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 514-636 |
Cow position: | chr9:11377920-11377799 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 514-636 |
Cow position: | chr9:15805899-15805782 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 103 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 28, 52 |
Conread position: | 514-636 |
Cow position: | chr9:18002930-18002808 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 105 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 514-636 |
Cow position: | chr9:22152062-22151939 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-636 |
Cow position: | chr9:22443603-22443484 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 514-636 |
Cow position: | chr9:27279333-27279452 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 514-636 |
Cow position: | chr9:29185113-29184989 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 514-636 |
Cow position: | chr9:34000596-34000480 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 514-636 |
Cow position: | chr9:35105766-35105647 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 514-636 |
Cow position: | chr9:35375449-35375572 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 28, 39 |
Conread position: | 514-636 |
Cow position: | chr9:49764681-49764800 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 514-636 |
Cow position: | chr9:52407188-52407310 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 515-636 |
Cow position: | chr9:1756120-1756001 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 516-632 |
Cow position: | chr9:5500879-5500997 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 516-636 |
Cow position: | chr9:1997163-1997283 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 28, 88 |
Conread position: | 516-636 |
Cow position: | chr9:10819805-10819689 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 520-629 |
Cow position: | chr9:29035006-29034894 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 520-631 |
Cow position: | chr9:33114375-33114485 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 91 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 520-631 |
Cow position: | chr9:43871005-43871117 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 520-632 |
Cow position: | chr9:1952240-1952129 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 95 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 35, 24 |
Conread position: | 520-632 |
Cow position: | chr9:38343917-38344030 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 520-634 |
Cow position: | chr9:32676707-32676821 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 74, 29 |
Conread position: | 520-635 |
Cow position: | chr9:51720870-51720760 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 520-636 |
Cow position: | chr9:1972972-1973085 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 520-636 |
Cow position: | chr9:6225425-6225310 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 520-636 |
Cow position: | chr9:11168760-11168873 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 520-636 |
Cow position: | chr9:21888198-21888310 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 96 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 520-636 |
Cow position: | chr9:35306088-35305973 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 114, 29 |
Conread position: | 520-636 |
Cow position: | chr9:42445953-42445836 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 520-636 |
Cow position: | chr9:47906251-47906137 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 35, 69 |
Conread position: | 520-636 |
Cow position: | chr9:50543396-50543279 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 520-636 |
Cow position: | chr9:50667451-50667567 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 67, 29 |
Conread position: | 521-632 |
Cow position: | chr9:11969217-11969327 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 521-636 |
Cow position: | chr9:29091823-29091938 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 524-636 |
Cow position: | chr9:26390802-26390911 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 530-636 |
Cow position: | chr9:7409816-7409921 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 88 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 530-636 |
Cow position: | chr9:42998431-42998324 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 91 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 543-630 |
Cow position: | chr9:1520687-1520600 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 545-632 |
Cow position: | chr9:41995762-41995849 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 78 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.