Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011J04.3 |
| Conread position: | 1-260 |
| Cow position: | chr13:17168319-17168047 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 1-371 |
| Cow position: | chr13:18645174-18645550 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 1-386 |
| Cow position: | chr13:21432934-21433339 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 117 |
| Conread position: | 2-325 |
| Cow position: | chr13:52753168-52752837 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 77 |
| Conread position: | 2-364 |
| Cow position: | chr13:19449343-19448973 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 2-371 |
| Cow position: | chr13:32313945-32314328 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 2-386 |
| Cow position: | chr13:18323253-18323643 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 273 |
| Conread position: | 12-371 |
| Cow position: | chr13:36906257-36905870 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 12-383 |
| Cow position: | chr13:42715833-42715438 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 12-386 |
| Cow position: | chr13:19469148-19468786 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 178 |
| Conread position: | 23-386 |
| Cow position: | chr13:55562636-55563010 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 30-185 |
| Cow position: | chr13:43733344-43733188 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 81, 141 |
| Conread position: | 34-182 |
| Cow position: | chr13:11228689-11228839 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 40-184 |
| Cow position: | chr13:20911552-20911701 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 50-386 |
| Cow position: | chr13:60174157-60174515 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 102-387 |
| Cow position: | chr13:52766148-52765858 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 93 |
| Conread position: | 181-386 |
| Cow position: | chr13:34055749-34055955 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 183-364 |
| Cow position: | chr13:11228870-11229053 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 183-371 |
| Cow position: | chr13:20911732-20911922 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 123 |
| Conread position: | 183-386 |
| Cow position: | chr13:17762236-17762432 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 184-371 |
| Cow position: | chr13:40114638-40114826 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 185-385 |
| Cow position: | chr13:23439782-23439978 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 186-371 |
| Cow position: | chr13:5738-5927 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 186-371 |
| Cow position: | chr13:56694484-56694670 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 186-372 |
| Cow position: | chr13:52050317-52050495 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 203-354 |
| Cow position: | chr13:43733133-43732981 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 273-371 |
| Cow position: | chr13:10019511-10019413 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.