Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011J04.3 |
| Conread position: | 1-371 |
| Cow position: | chr15:29511891-29511511 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 63 |
| Conread position: | 1-390 |
| Cow position: | chr15:31949749-31950147 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 153 |
| Conread position: | 2-384 |
| Cow position: | chr15:229292-228893 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 171 |
| Conread position: | 20-371 |
| Cow position: | chr15:38505517-38505892 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 220 |
| Conread position: | 24-390 |
| Cow position: | chr15:22127528-22127143 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 100, 238 |
| Conread position: | 25-351 |
| Cow position: | chr15:1343685-1343352 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 25-386 |
| Cow position: | chr15:5406344-5405973 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 287 |
| Conread position: | 33-371 |
| Cow position: | chr15:35611446-35611795 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 33-372 |
| Cow position: | chr15:53035175-53035530 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 227 |
| Conread position: | 33-397 |
| Cow position: | chr15:5236950-5237322 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 35, 258 |
| Conread position: | 40-383 |
| Cow position: | chr15:10855332-10855678 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 51-386 |
| Cow position: | chr15:30553264-30552914 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 284 |
| Conread position: | 79-377 |
| Cow position: | chr15:39819858-39820164 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 97-369 |
| Cow position: | chr15:10325504-10325780 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 183-389 |
| Cow position: | chr15:10562650-10562451 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 206-371 |
| Cow position: | chr15:9745711-9745875 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 207-362 |
| Cow position: | chr15:660385-660235 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 220-386 |
| Cow position: | chr15:32303893-32303725 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 166 |
| Conread position: | 235-370 |
| Cow position: | chr15:27249983-27249851 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 239-371 |
| Cow position: | chr15:15230826-15230700 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 854-995 |
| Cow position: | chr15:9413928-9414066 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 53 |
| Conread position: | 859-989 |
| Cow position: | chr15:10624797-10624671 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.