Cow genome map

Conread name: Ss1.1-Pig3-SRG8011J04.3

Conread position: 1-370
Cow position: chr16:10672262-10672646 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 200

Conread position: 1-389
Cow position: chr16:15925147-15924761 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 140, 50

Conread position: 2-298
Cow position: chr16:53441854-53442136 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 124, 44

Conread position: 12-371
Cow position: chr16:33472104-33471761 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 119, 24

Conread position: 14-308
Cow position: chr16:17883441-17883735 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 134

Conread position: 19-380
Cow position: chr16:35204105-35204474 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 72

Conread position: 23-176
Cow position: chr16:53591097-53591255 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 142

Conread position: 24-325
Cow position: chr16:15224295-15224599 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 33

Conread position: 30-371
Cow position: chr16:4898133-4898468 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 204, 43

Conread position: 31-336
Cow position: chr16:8507646-8507954 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 89

Conread position: 36-386
Cow position: chr16:8455973-8456338 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 79

Conread position: 51-401
Cow position: chr16:16126432-16126786 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 55

Conread position: 54-371
Cow position: chr16:54483155-54482821 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 13, 192

Conread position: 54-386
Cow position: chr16:16719673-16720012 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 72-386
Cow position: chr16:21662760-21662435 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 105

Conread position: 75-386
Cow position: chr16:326783-326453 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 95

Conread position: 76-371
Cow position: chr16:33472469-33472774 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 107

Conread position: 183-379
Cow position: chr16:8852279-8852089 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 186-371
Cow position: chr16:21439904-21439714 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 15

Conread position: 186-386
Cow position: chr16:31532561-31532766 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 133, 0

Conread position: 230-370
Cow position: chr16:33279509-33279369 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 238-434
Cow position: chr16:11600907-11601103 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 141, 170

Conread position: 249-372
Cow position: chr16:52106478-52106355 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 252-386
Cow position: chr16:52642959-52642826 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 276-371
Cow position: chr16:30617723-30617818 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 865-994
Cow position: chr16:25844970-25845096 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.