Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011J04.3 |
| Conread position: | 4-182 |
| Cow position: | chr25:9567828-9568000 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 12-379 |
| Cow position: | chr25:36164219-36163836 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 234 |
| Conread position: | 15-182 |
| Cow position: | chr25:8598219-8598050 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 21-371 |
| Cow position: | chr25:37393800-37393441 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 42 |
| Conread position: | 66-371 |
| Cow position: | chr25:22264757-22265062 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 58, 116 |
| Conread position: | 131-335 |
| Cow position: | chr25:6460740-6460948 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 178-371 |
| Cow position: | chr25:16314262-16314075 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 183-386 |
| Cow position: | chr25:8597110-8596919 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 183-386 |
| Cow position: | chr25:21507760-21507965 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 186-407 |
| Cow position: | chr25:26186707-26186484 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 206-371 |
| Cow position: | chr25:27224196-27224033 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 211-371 |
| Cow position: | chr25:25812773-25812615 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 230-371 |
| Cow position: | chr25:5788804-5788944 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 232-371 |
| Cow position: | chr25:5859095-5859232 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 283-386 |
| Cow position: | chr25:2371042-2370940 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 823-986 |
| Cow position: | chr25:30354197-30354033 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 846-987 |
| Cow position: | chr25:6748161-6748021 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 860-991 |
| Cow position: | chr25:26314828-26314957 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.