Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011J04.3 |
| Conread position: | 2-385 |
| Cow position: | chr27:12664609-12664197 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 3-386 |
| Cow position: | chr27:24955175-24954796 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 11-386 |
| Cow position: | chr27:11495132-11494743 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 12-199 |
| Cow position: | chr27:28247403-28247589 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 105, 50 |
| Conread position: | 12-353 |
| Cow position: | chr27:13795833-13795480 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 12-370 |
| Cow position: | chr27:22258083-22258462 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 12-386 |
| Cow position: | chr27:24915156-24914769 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 25-182 |
| Cow position: | chr27:24955899-24956057 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 99, 49 |
| Conread position: | 25-364 |
| Cow position: | chr27:26818258-26817914 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 33-364 |
| Cow position: | chr27:28224727-28225070 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 74-386 |
| Cow position: | chr27:13664282-13663960 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 50, 80 |
| Conread position: | 83-371 |
| Cow position: | chr27:26869046-26868757 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 84-386 |
| Cow position: | chr27:11503844-11503530 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 91-372 |
| Cow position: | chr27:26841369-26841074 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 109-371 |
| Cow position: | chr27:23993575-23993312 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 142-368 |
| Cow position: | chr27:22851764-22851983 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 170-371 |
| Cow position: | chr27:28247884-28248079 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 183-371 |
| Cow position: | chr27:15015719-15015906 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 183-371 |
| Cow position: | chr27:24398444-24398256 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 125, 182 |
| Conread position: | 183-386 |
| Cow position: | chr27:30835173-30834970 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-371 |
| Cow position: | chr27:24956090-24956283 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 186-371 |
| Cow position: | chr27:30472096-30471912 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 186-389 |
| Cow position: | chr27:30439544-30439748 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 203-386 |
| Cow position: | chr27:15877695-15877885 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 230-386 |
| Cow position: | chr27:16610956-16611114 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
Show alignments to all cow chromosomes.