Cow genome map

Conread name: Ss1.1-Pig3-SRG8011J04.3

Conread position: 1-346
Cow position: chr28:22015315-22015659 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 189, 15

Conread position: 2-371
Cow position: chr28:30981933-30981568 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 75

Conread position: 3-346
Cow position: chr28:4212522-4212167 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 229

Conread position: 12-185
Cow position: chr28:3409643-3409464 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 80

Conread position: 12-201
Cow position: chr28:5100313-5100506 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 51

Conread position: 12-347
Cow position: chr28:30968474-30968140 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 112, 36

Conread position: 12-395
Cow position: chr28:5309096-5309494 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 97

Conread position: 13-386
Cow position: chr28:7586930-7587321 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 83

Conread position: 23-386
Cow position: chr28:24409235-24408872 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 45, 99

Conread position: 25-371
Cow position: chr28:4606534-4606880 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 18, 34

Conread position: 39-371
Cow position: chr28:1516721-1517063 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 20

Conread position: 40-317
Cow position: chr28:5895722-5896015 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 122

Conread position: 44-371
Cow position: chr28:27763591-27763275 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 47

Conread position: 66-386
Cow position: chr28:22325589-22325280 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 207
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 292, 23

Conread position: 69-386
Cow position: chr28:9168913-9168583 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 169

Conread position: 70-339
Cow position: chr28:3681037-3680756 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 91-371
Cow position: chr28:9679789-9680075 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 119

Conread position: 123-371
Cow position: chr28:1188384-1188128 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 30

Conread position: 137-380
Cow position: chr28:9898150-9897908 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 15

Conread position: 180-386
Cow position: chr28:16355328-16355530 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 175, 20

Conread position: 183-371
Cow position: chr28:3713542-3713361 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 43

Conread position: 183-386
Cow position: chr28:3409436-3409243 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 172, 78

Conread position: 183-386
Cow position: chr28:22310869-22310669 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 175, 47

Conread position: 183-386
Cow position: chr28:22337788-22337585 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 60

Conread position: 203-386
Cow position: chr28:3172113-3171927 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 231-371
Cow position: chr28:5100566-5100706 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 231-386
Cow position: chr28:13700281-13700125 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 146

Conread position: 836-994
Cow position: chr28:27137478-27137322 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 65

Show alignments to all cow chromosomes.