Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011J04.3 |
| Conread position: | 1-207 |
| Cow position: | chr29:38943790-38944006 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 19-371 |
| Cow position: | chr29:27102551-27102899 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 21-371 |
| Cow position: | chr29:42479206-42478853 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 23-182 |
| Cow position: | chr29:25069788-25069637 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 24-316 |
| Cow position: | chr29:40671647-40671343 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 33-279 |
| Cow position: | chr29:42843180-42842931 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 147, 76 |
| Conread position: | 34-382 |
| Cow position: | chr29:40734761-40734399 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 37-261 |
| Cow position: | chr29:42933611-42933380 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 136, 54 |
| Conread position: | 75-371 |
| Cow position: | chr29:24357827-24357521 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 78-386 |
| Cow position: | chr29:377649-377963 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 46, 154 |
| Conread position: | 183-371 |
| Cow position: | chr29:25069606-25069419 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 183-371 |
| Cow position: | chr29:26220477-26220664 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 183-371 |
| Cow position: | chr29:41063563-41063748 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 183-386 |
| Cow position: | chr29:1935321-1935521 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 203-370 |
| Cow position: | chr29:38944273-38944437 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 151, 32 |
| Conread position: | 203-386 |
| Cow position: | chr29:24184804-24184618 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 219-375 |
| Cow position: | chr29:842699-842856 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 244-391 |
| Cow position: | chr29:492697-492547 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 854-1006 |
| Cow position: | chr29:4004908-4004758 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 18 |
Show alignments to all cow chromosomes.