Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011J04.3 |
| Conread position: | 1-371 |
| Cow position: | chr3:10422373-10421989 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 63, 254 |
| Conread position: | 1-386 |
| Cow position: | chr3:59566060-59565666 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 156 |
| Conread position: | 12-296 |
| Cow position: | chr3:40790649-40790368 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 29 |
| Conread position: | 12-371 |
| Cow position: | chr3:8597552-8597909 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 15 |
| Conread position: | 21-385 |
| Cow position: | chr3:26489986-26490347 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 174, 56 |
| Conread position: | 24-385 |
| Cow position: | chr3:48220520-48220897 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 234 |
| Conread position: | 29-371 |
| Cow position: | chr3:83269050-83269387 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 30 |
| Conread position: | 33-389 |
| Cow position: | chr3:1991618-1991991 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 141 |
| Conread position: | 183-353 |
| Cow position: | chr3:64503279-64503445 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 183-418 |
| Cow position: | chr3:5478271-5478039 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 186-386 |
| Cow position: | chr3:58529526-58529322 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 203-386 |
| Cow position: | chr3:71284092-71283910 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 204-387 |
| Cow position: | chr3:70921315-70921140 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 109, 41 |
| Conread position: | 239-386 |
| Cow position: | chr3:47728398-47728252 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 0 |
Show alignments to all cow chromosomes.