Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8011J04.3 |
| Conread position: | 1-296 |
| Cow position: | chr8:25510206-25509905 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 131, 19 |
| Conread position: | 1-371 |
| Cow position: | chr8:53343099-53343457 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 56, 19 |
| Conread position: | 2-314 |
| Cow position: | chr8:51487554-51487865 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 2-371 |
| Cow position: | chr8:4546109-4546498 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 67 |
| Conread position: | 13-386 |
| Cow position: | chr8:48188809-48189202 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 24-182 |
| Cow position: | chr8:47442806-47442646 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 24-385 |
| Cow position: | chr8:47542674-47542293 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 24-404 |
| Cow position: | chr8:761066-761450 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 268 |
| Conread position: | 25-262 |
| Cow position: | chr8:40887136-40887386 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 188 |
| Conread position: | 29-371 |
| Cow position: | chr8:53655087-53654747 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 95, 60 |
| Conread position: | 33-386 |
| Cow position: | chr8:18001412-18001772 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 72-371 |
| Cow position: | chr8:11647281-11646967 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 77-385 |
| Cow position: | chr8:39735472-39735792 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 110-386 |
| Cow position: | chr8:59492704-59492408 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 183-385 |
| Cow position: | chr8:35557753-35557553 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 183-389 |
| Cow position: | chr8:58409424-58409219 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 184-370 |
| Cow position: | chr8:47442614-47442429 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 59 |
| Conread position: | 185-386 |
| Cow position: | chr8:27700636-27700432 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 186-371 |
| Cow position: | chr8:24343893-24344078 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 226-386 |
| Cow position: | chr8:38476288-38476448 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 132, 76 |
| Conread position: | 244-407 |
| Cow position: | chr8:3900704-3900536 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 258-386 |
| Cow position: | chr8:34798123-34797998 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 273-386 |
| Cow position: | chr8:36644965-36644851 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 289-390 |
| Cow position: | chr8:25509687-25509585 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 489-651 |
| Cow position: | chr8:26415117-26414950 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.