Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8015P11.5
        

               Conread position:
               66-220
               

               Cow position:
               chr14:24207591-24207438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               66-226
               

               Cow position:
               chr14:5363459-5363300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               77-226
               

               Cow position:
               chr14:34207898-34208046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               79-220
               

               Cow position:
               chr14:20890880-20891022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               81-220
               

               Cow position:
               chr14:8807859-8807718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               86-511
               

               Cow position:
               chr14:35408243-35408670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               293
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               89-225
               

               Cow position:
               chr14:10487795-10487661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               95-220
               

               Cow position:
               chr14:9228520-9228646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               324-528
               

               Cow position:
               chr14:8196299-8196097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               326-528
               

               Cow position:
               chr14:3701117-3700914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               336-528
               

               Cow position:
               chr14:39652506-39652691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               362-527
               

               Cow position:
               chr14:50587938-50587775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 60
               
Show alignments to all cow chromosomes.