Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8015P11.5 |
| Conread position: | 70-226 |
| Cow position: | chr17:25546066-25546224 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 81-221 |
| Cow position: | chr17:38189756-38189896 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 81-527 |
| Cow position: | chr17:1325394-1324975 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 132 |
| Conread position: | 86-220 |
| Cow position: | chr17:15483599-15483734 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 88-218 |
| Cow position: | chr17:891545-891675 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 92-220 |
| Cow position: | chr17:1491414-1491286 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 92-220 |
| Cow position: | chr17:21461268-21461142 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 92-220 |
| Cow position: | chr17:24997215-24997344 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 92-221 |
| Cow position: | chr17:11072421-11072293 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 92-224 |
| Cow position: | chr17:27302197-27302330 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 92-225 |
| Cow position: | chr17:1730389-1730255 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 92-225 |
| Cow position: | chr17:1756788-1756922 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 115-220 |
| Cow position: | chr17:25147977-25148082 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-528 |
| Cow position: | chr17:30292200-30292467 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 362-517 |
| Cow position: | chr17:11292027-11292183 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 376-528 |
| Cow position: | chr17:4878939-4878789 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 399-526 |
| Cow position: | chr17:29040171-29040046 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 399-527 |
| Cow position: | chr17:43261673-43261799 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 399-528 |
| Cow position: | chr17:1757119-1757244 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 399-528 |
| Cow position: | chr17:25546431-25546554 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.