Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8015P11.5 |
| Conread position: | 78-220 |
| Cow position: | chr2:38872067-38871926 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 79-226 |
| Cow position: | chr2:12146408-12146262 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 79-234 |
| Cow position: | chr2:45773436-45773282 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 81-219 |
| Cow position: | chr2:43551381-43551239 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 81-219 |
| Cow position: | chr2:44556526-44556669 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 81-224 |
| Cow position: | chr2:50138283-50138427 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 86-220 |
| Cow position: | chr2:34328733-34328869 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 92-218 |
| Cow position: | chr2:74692948-74693074 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 92-220 |
| Cow position: | chr2:46008440-46008567 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 92-221 |
| Cow position: | chr2:46939292-46939165 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 92-227 |
| Cow position: | chr2:46025567-46025435 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 92-248 |
| Cow position: | chr2:46408694-46408850 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 95-219 |
| Cow position: | chr2:37076365-37076490 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 128-220 |
| Cow position: | chr2:45284306-45284214 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-224 |
| Cow position: | chr2:46215535-46215631 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-528 |
| Cow position: | chr2:44622413-44622703 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 101 |
| Conread position: | 234-528 |
| Cow position: | chr2:45773245-45772958 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 259-517 |
| Cow position: | chr2:43551142-43550892 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 259-528 |
| Cow position: | chr2:12146182-12145922 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 122, 21 |
| Conread position: | 276-528 |
| Cow position: | chr2:34909024-34909264 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 107, 5 |
| Conread position: | 278-523 |
| Cow position: | chr2:43009931-43010179 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 52 |
| Conread position: | 279-462 |
| Cow position: | chr2:45284082-45283905 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 103, 49 |
| Conread position: | 293-512 |
| Cow position: | chr2:63685975-63686185 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 301-527 |
| Cow position: | chr2:46516890-46516660 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 309-519 |
| Cow position: | chr2:50140284-50140496 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 326-528 |
| Cow position: | chr2:64175698-64175905 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 99 |
| Conread position: | 343-528 |
| Cow position: | chr2:70153608-70153793 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 348-519 |
| Cow position: | chr2:38874363-38874193 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 362-523 |
| Cow position: | chr2:36551722-36551563 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 398-528 |
| Cow position: | chr2:63043803-63043933 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 399-528 |
| Cow position: | chr2:46008761-46008888 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 408-528 |
| Cow position: | chr2:45770059-45769939 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 53, 13 |
Show alignments to all cow chromosomes.