Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8015P11.5 |
| Conread position: | 81-191 |
| Cow position: | chr21:42169567-42169456 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 81-220 |
| Cow position: | chr21:1184620-1184760 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 8, 124 |
| Conread position: | 81-221 |
| Cow position: | chr21:41532560-41532419 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 83-220 |
| Cow position: | chr21:12898775-12898638 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 88-226 |
| Cow position: | chr21:6326523-6326661 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 90-217 |
| Cow position: | chr21:29200746-29200619 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 92-226 |
| Cow position: | chr21:42475115-42475248 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 95-226 |
| Cow position: | chr21:8851235-8851102 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 101-216 |
| Cow position: | chr21:7747723-7747608 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 229-524 |
| Cow position: | chr21:45816340-45816615 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 149, 13 |
| Conread position: | 230-526 |
| Cow position: | chr21:12898590-12898306 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 12 |
| Conread position: | 259-528 |
| Cow position: | chr21:43626802-43627062 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 276-523 |
| Cow position: | chr21:22389017-22389260 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 101, 5 |
| Conread position: | 276-528 |
| Cow position: | chr21:46804076-46803839 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 5 |
| Conread position: | 309-526 |
| Cow position: | chr21:7747492-7747268 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 329-527 |
| Cow position: | chr21:24207444-24207253 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 337-528 |
| Cow position: | chr21:1188300-1188493 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 354-520 |
| Cow position: | chr21:20139928-20139760 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 392-528 |
| Cow position: | chr21:7074371-7074502 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 398-524 |
| Cow position: | chr21:24428926-24428802 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 399-523 |
| Cow position: | chr21:17934029-17934152 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 399-528 |
| Cow position: | chr21:24735586-24735711 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 417-528 |
| Cow position: | chr21:41569839-41569950 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 103 |
Show alignments to all cow chromosomes.