Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8015P11.5
        

               Conread position:
               1-84
               

               Cow position:
               chr23:3527850-3527767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               66-226
               

               Cow position:
               chr23:13562307-13562466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               78-226
               

               Cow position:
               chr23:5424866-5424721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               81-528
               

               Cow position:
               chr23:3521914-3521467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-226
               

               Cow position:
               chr23:3552379-3552516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               92-226
               

               Cow position:
               chr23:1164906-1165040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               92-234
               

               Cow position:
               chr23:37098886-37098742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               92-238
               

               Cow position:
               chr23:4506752-4506604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               95-220
               

               Cow position:
               chr23:3531823-3531699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               234-522
               

               Cow position:
               chr23:1624198-1624474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 88
               

               Conread position:
               328-528
               

               Cow position:
               chr23:3529801-3529602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               392-528
               

               Cow position:
               chr23:4785531-4785398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.