Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8015P11.5
        

               Conread position:
               81-219
               

               Cow position:
               chr28:34761471-34761332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               84-217
               

               Cow position:
               chr28:9792884-9792749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               92-227
               

               Cow position:
               chr28:18714482-18714347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               95-438
               

               Cow position:
               chr28:5414767-5414414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 191
               

               Conread position:
               96-229
               

               Cow position:
               chr28:87370-87503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 108
               

               Conread position:
               276-527
               

               Cow position:
               chr28:93194-92945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 5
               

               Conread position:
               304-518
               

               Cow position:
               chr28:9792618-9792402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               324-528
               

               Cow position:
               chr28:10695751-10695948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               326-520
               

               Cow position:
               chr28:34761177-34760976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               400-517
               

               Cow position:
               chr28:11312137-11312022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               408-528
               

               Cow position:
               chr28:28069438-28069318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 13
               
Show alignments to all cow chromosomes.