Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8015P11.5 |
| Conread position: | 79-214 |
| Cow position: | chr3:7837645-7837511 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 80-220 |
| Cow position: | chr3:19236324-19236470 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 81-220 |
| Cow position: | chr3:52026749-52026609 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 81-528 |
| Cow position: | chr3:4127023-4126590 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 113 |
| Conread position: | 90-411 |
| Cow position: | chr3:22702922-22703230 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 95-220 |
| Cow position: | chr3:37256162-37256036 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 97-234 |
| Cow position: | chr3:22699595-22699730 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 101-528 |
| Cow position: | chr3:36543914-36543480 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 112-226 |
| Cow position: | chr3:58594549-58594662 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 242-528 |
| Cow position: | chr3:26586171-26585908 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 138, 87 |
| Conread position: | 242-528 |
| Cow position: | chr3:46214899-46214627 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 210, 77 |
| Conread position: | 245-513 |
| Cow position: | chr3:70389415-70389162 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 134, 43 |
| Conread position: | 259-528 |
| Cow position: | chr3:37255944-37255680 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 276-528 |
| Cow position: | chr3:34211996-34211749 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 280-528 |
| Cow position: | chr3:52026247-52026010 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 326-528 |
| Cow position: | chr3:5450728-5450526 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 140, 95 |
| Conread position: | 326-528 |
| Cow position: | chr3:28926046-28925851 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 332-528 |
| Cow position: | chr3:56389041-56389238 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 370-528 |
| Cow position: | chr3:75076899-75076744 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 52 |
Show alignments to all cow chromosomes.