Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8015P11.5 |
| Conread position: | 79-219 |
| Cow position: | chr4:20316387-20316246 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 81-219 |
| Cow position: | chr4:21615150-21615015 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 92-226 |
| Cow position: | chr4:6656425-6656561 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 94-220 |
| Cow position: | chr4:32366670-32366796 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 106-227 |
| Cow position: | chr4:26685816-26685938 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 229-461 |
| Cow position: | chr4:56413040-56413265 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 148, 99 |
| Conread position: | 229-514 |
| Cow position: | chr4:20315184-20314908 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 229-528 |
| Cow position: | chr4:32366844-32367133 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 148, 13 |
| Conread position: | 234-438 |
| Cow position: | chr4:21614963-21614769 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 259-528 |
| Cow position: | chr4:59065098-59064839 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 184, 45 |
| Conread position: | 307-523 |
| Cow position: | chr4:42610304-42610519 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 326-515 |
| Cow position: | chr4:6656684-6656875 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 326-523 |
| Cow position: | chr4:38655719-38655520 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 97 |
| Conread position: | 331-528 |
| Cow position: | chr4:20648132-20648334 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 336-527 |
| Cow position: | chr4:62841334-62841143 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 338-520 |
| Cow position: | chr4:45788077-45787892 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 362-528 |
| Cow position: | chr4:27438770-27438934 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 398-523 |
| Cow position: | chr4:66308199-66308075 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 407-528 |
| Cow position: | chr4:1594028-1594149 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 19 |
Show alignments to all cow chromosomes.