Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8015P11.5 |
| Conread position: | 79-220 |
| Cow position: | chr8:48978539-48978680 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 81-216 |
| Cow position: | chr8:13324284-13324150 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 81-220 |
| Cow position: | chr8:52022654-52022791 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 112 |
| Conread position: | 81-425 |
| Cow position: | chr8:5519144-5518807 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 130 |
| Conread position: | 86-217 |
| Cow position: | chr8:27827435-27827567 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 86-220 |
| Cow position: | chr8:6569251-6569118 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 89-220 |
| Cow position: | chr8:38367511-38367643 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 92-211 |
| Cow position: | chr8:45858287-45858164 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 92-226 |
| Cow position: | chr8:13847226-13847361 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 95-218 |
| Cow position: | chr8:9294560-9294684 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 95-226 |
| Cow position: | chr8:1626416-1626285 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 119 |
| Conread position: | 97-189 |
| Cow position: | chr8:8768487-8768394 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 224-528 |
| Cow position: | chr8:35511787-35512085 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 158, 35 |
| Conread position: | 229-512 |
| Cow position: | chr8:48978725-48979000 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 149, 99 |
| Conread position: | 234-327 |
| Cow position: | chr8:6569065-6568972 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-528 |
| Cow position: | chr8:38368172-38368431 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 259-520 |
| Cow position: | chr8:4051930-4051677 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 111, 21 |
| Conread position: | 283-528 |
| Cow position: | chr8:33173174-33172921 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 148 |
| Conread position: | 304-528 |
| Cow position: | chr8:5656943-5656721 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 309-528 |
| Cow position: | chr8:5653843-5653625 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 101 |
| Conread position: | 310-528 |
| Cow position: | chr8:54316747-54316968 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 312-527 |
| Cow position: | chr8:44479761-44479975 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 326-528 |
| Cow position: | chr8:4935014-4935218 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 53, 97 |
| Conread position: | 330-520 |
| Cow position: | chr8:6568438-6568255 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 336-528 |
| Cow position: | chr8:52023822-52024011 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 341-512 |
| Cow position: | chr8:50704967-50705138 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 359-516 |
| Cow position: | chr8:13324115-13323957 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 384-525 |
| Cow position: | chr8:40292283-40292147 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 399-528 |
| Cow position: | chr8:21056273-21056147 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 22 |
Show alignments to all cow chromosomes.