Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8015P11.5 |
| Conread position: | 80-226 |
| Cow position: | chr9:44609946-44609798 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 81-191 |
| Cow position: | chr9:5478821-5478710 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 81-220 |
| Cow position: | chr9:6126806-6126944 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 81-220 |
| Cow position: | chr9:6133936-6134075 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 86-217 |
| Cow position: | chr9:10160231-10160364 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 88-217 |
| Cow position: | chr9:7798705-7798576 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 92-225 |
| Cow position: | chr9:6590205-6590069 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 92-227 |
| Cow position: | chr9:10290227-10290362 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 95-226 |
| Cow position: | chr9:36396901-36396767 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 229-528 |
| Cow position: | chr9:25799000-25798712 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 279-521 |
| Cow position: | chr9:44609665-44609426 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 99, 48 |
| Conread position: | 327-526 |
| Cow position: | chr9:6127187-6127387 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 361-528 |
| Cow position: | chr9:58556874-58556705 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 365-528 |
| Cow position: | chr9:45521746-45521910 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 370-526 |
| Cow position: | chr9:12365043-12364886 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 392-523 |
| Cow position: | chr9:23950753-23950884 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 392-528 |
| Cow position: | chr9:6589880-6589748 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 392-528 |
| Cow position: | chr9:49457929-49457794 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 405-528 |
| Cow position: | chr9:5478146-5478027 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.