Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8017B08.3 |
| Conread position: | 1-353 |
| Cow position: | chr17:44468030-44468384 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 126, 352 |
| Conread position: | 1-446 |
| Cow position: | chr17:22452211-22451763 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 122, 379 |
| Conread position: | 1-454 |
| Cow position: | chr17:22452295-22451839 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-595 |
| Cow position: | chr17:44467778-44468378 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 367 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 1-596 |
| Cow position: | chr17:41440785-41440184 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 428 |
| Conread position: | 1-677 |
| Cow position: | chr17:22552178-22551496 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 397 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 130, 633 |
| Conread position: | 1-698 |
| Cow position: | chr17:44467610-44468313 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 416 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 124, 394 |
| Conread position: | 1-705 |
| Cow position: | chr17:22552934-22552225 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 306 |
| Conread position: | 1-722 |
| Cow position: | chr17:22552262-22551535 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 422 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 127, 300 |
| Conread position: | 1-741 |
| Cow position: | chr17:41440953-41440206 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 79 |
| Conread position: | 1-743 |
| Cow position: | chr17:22552514-22551766 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 92 |
| Conread position: | 1-744 |
| Cow position: | chr17:44467526-44468275 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 292 |
| Conread position: | 1-745 |
| Cow position: | chr17:22552850-22552100 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 425 |
| Conread position: | 1-745 |
| Cow position: | chr17:41441037-41440287 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 338 |
| Conread position: | 5-743 |
| Cow position: | chr17:22553013-22552270 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 5 |
| Conread position: | 6-667 |
| Cow position: | chr17:41440864-41440198 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 143 |
| Conread position: | 7-734 |
| Cow position: | chr17:44467364-44468097 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 478 |
| Conread position: | 49-674 |
| Cow position: | chr17:22473300-22473932 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 370 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 85, 153 |
| Conread position: | 53-723 |
| Cow position: | chr17:22452411-22451735 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 398 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 74, 577 |
| Conread position: | 64-702 |
| Cow position: | chr17:22452316-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 374 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 85-695 |
| Cow position: | chr17:22499393-22498777 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 361 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 341 |
| Conread position: | 100-711 |
| Cow position: | chr17:22590253-22589637 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 363 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 143-705 |
| Cow position: | chr17:22452402-22451838 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 334 |
| Conread position: | 157-745 |
| Cow position: | chr17:22590109-22589518 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 343 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 240, 230 |
| Conread position: | 157-745 |
| Cow position: | chr17:41441046-41440455 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 72 |
| Conread position: | 163-736 |
| Cow position: | chr17:22553105-22552529 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 337 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 146, 135 |
| Conread position: | 164-745 |
| Cow position: | chr17:44467355-44467940 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 357 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 12, 307 |
| Conread position: | 171-745 |
| Cow position: | chr17:41441116-41440539 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 58 |
| Conread position: | 229-737 |
| Cow position: | chr17:22452400-22451889 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 308 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 72, 82 |
| Conread position: | 235-745 |
| Cow position: | chr17:22473405-22473918 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 146, 139 |
| Conread position: | 247-745 |
| Cow position: | chr17:22553105-22552604 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 317 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 92, 97 |
| Conread position: | 249-737 |
| Cow position: | chr17:22499394-22498903 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 217, 449 |
| Conread position: | 253-745 |
| Cow position: | chr17:41441118-41440623 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 229 |
| Conread position: | 312-743 |
| Cow position: | chr17:22452401-22451967 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 165, 374 |
| Conread position: | 418-745 |
| Cow position: | chr17:22499393-22499063 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 476-743 |
| Cow position: | chr17:22452402-22452135 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 231, 219 |
| Conread position: | 504-746 |
| Cow position: | chr17:41441116-41440874 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.