• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8017B08.3
        

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:56267457-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 142
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:33064011-33063598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
126, 211
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr18:53610128-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
126, 157
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:50281845-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr18:43168047-43168547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr18:40306760-40307344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 469
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr18:56128628-56129216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
133, 201
               

               
Conread position:
               
1-585
               

               
Cow position:
               
chr18:56329428-56328838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 222
               

               
Conread position:
               
1-587
               

               
Cow position:
               
chr18:42792311-42792903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
1-589
               

               
Cow position:
               
chr18:42724501-42723907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
114, 215
               

               
Conread position:
               
1-652
               

               
Cow position:
               
chr18:55067023-55066366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 166
               

               
Conread position:
               
1-665
               

               
Cow position:
               
chr18:56329512-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 372
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:53610380-53609702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 133
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:56316388-56317067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 606
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr18:56391512-56390833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 218
               

               
Conread position:
               
1-676
               

               
Cow position:
               
chr18:41949009-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-676
               

               
Cow position:
               
chr18:44184631-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
128, 232
               

               
Conread position:
               
1-676
               

               
Cow position:
               
chr18:52012188-52011504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 651
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chr18:51789554-51788854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
131, 200
               

               
Conread position:
               
1-703
               

               
Cow position:
               
chr18:53635537-53634831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
124, 484
               

               
Conread position:
               
1-705
               

               
Cow position:
               
chr18:51812629-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
130, 232
               

               
Conread position:
               
1-706
               

               
Cow position:
               
chr18:49021738-49022438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 147
               

               
Conread position:
               
1-712
               

               
Cow position:
               
chr18:51812713-51811996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 316
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:42792143-42792865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
124, 148
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr18:50848758-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:42791975-42792702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
130, 372
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:42960128-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 311
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:51789470-51788743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 316
               

               
Conread position:
               
1-722
               

               
Cow position:
               
chr18:56128460-56129186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 463
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:40324797-40324069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 425
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:41949177-41948449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:43022732-43022004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
141, 125
               

               
Conread position:
               
1-723
               

               
Cow position:
               
chr18:44240096-44240824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
1-731
               

               
Cow position:
               
chr18:43022816-43022080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
127, 294
               

               
Conread position:
               
1-731
               

               
Cow position:
               
chr18:56128292-56129028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 425
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:42985221-42984482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 300
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:49032875-49032136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 652
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:53586744-53586005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 166
               

               
Conread position:
               
1-734
               

               
Cow position:
               
chr18:56316304-56317043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 659
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:41197578-41198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 367
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:43022984-43022242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:43093583-43092841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:44184799-44184057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:44398352-44397610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
127, 165
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:49032791-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
1-737
               

               
Cow position:
               
chr18:52447447-52448189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 484
               

               
Conread position:
               
1-739
               

               
Cow position:
               
chr18:42791891-42792635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
1-739
               

               
Cow position:
               
chr18:43175521-43174777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:42693709-42692961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
1-743
               

               
Cow position:
               
chr18:44398268-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
127, 201
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:33064767-33064017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:40306340-40307090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
120, 148
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:44184715-44183965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:49032959-49032209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:49033043-49032293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 370
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:49033211-49032461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 217
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:50059536-50058786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 211
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:50848674-50849424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:52012356-52011606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 377
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:53635873-53635123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 494
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:55523479-55524229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
122, 160
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:56329680-56328930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:56329932-56329182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 299
               

               
Conread position:
               
1-745
               

               
Cow position:
               
chr18:56330184-56329434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 222
               

               
Conread position:
               
1-746
               

               
Cow position:
               
chr18:56316220-56316971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 395
               

               
Conread position:
               
1-760
               

               
Cow position:
               
chr18:42744714-42743949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
1-767
               

               
Cow position:
               
chr18:42675150-42674378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
127, 316
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr18:1418174-1418598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
2-743
               

               
Cow position:
               
chr18:42694044-42693297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 293
               

               
Conread position:
               
2-745
               

               
Cow position:
               
chr18:43167712-43168461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
3-446
               

               
Cow position:
               
chr18:51839388-51838942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr18:56494017-56494471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
3-569
               

               
Cow position:
               
chr18:47846596-47846024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
3-578
               

               
Cow position:
               
chr18:55497617-55497036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
122, 395
               

               
Conread position:
               
3-722
               

               
Cow position:
               
chr18:51400369-51401094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 135
               

               
Conread position:
               
3-723
               

               
Cow position:
               
chr18:49022317-49023041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 262
               

               
Conread position:
               
3-738
               

               
Cow position:
               
chr18:53610462-53609721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
3-745
               

               
Cow position:
               
chr18:53636039-53635291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 218
               

               
Conread position:
               
3-745
               

               
Cow position:
               
chr18:56128126-56128874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-671
               

               
Cow position:
               
chr18:40075029-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 89
               

               
Conread position:
               
4-705
               

               
Cow position:
               
chr18:43093664-43092958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
6-710
               

               
Cow position:
               
chr18:53559934-53560644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
15-327
               

               
Cow position:
               
chr18:56391969-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
16-403
               

               
Cow position:
               
chr18:56494114-56494503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
115, 387
               

               
Conread position:
               
16-662
               

               
Cow position:
               
chr18:40306689-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
16-722
               

               
Cow position:
               
chr18:53559860-53560572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 372
               

               
Conread position:
               
16-743
               

               
Cow position:
               
chr18:56128389-56129124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 710
               

               
Conread position:
               
16-767
               

               
Cow position:
               
chr18:51839543-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 419
               

               
Conread position:
               
22-745
               

               
Cow position:
               
chr18:42694192-42693463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
23-494
               

               
Cow position:
               
chr18:49021676-49022154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
100, 116
               

               
Conread position:
               
23-668
               

               
Cow position:
               
chr18:55497681-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 355
               

               
Conread position:
               
23-734
               

               
Cow position:
               
chr18:56391574-56390857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
23-743
               

               
Cow position:
               
chr18:42837827-42837101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
105, 294
               

               
Conread position:
               
23-743
               

               
Cow position:
               
chr18:56329574-56328848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
23-745
               

               
Cow position:
               
chr18:49033105-49032377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
25-673
               

               
Cow position:
               
chr18:42792251-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
25-705
               

               
Cow position:
               
chr18:50059092-50058409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
106, 209
               

               
Conread position:
               
25-712
               

               
Cow position:
               
chr18:50083309-50084002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
103, 114
               

               
Conread position:
               
25-712
               

               
Cow position:
               
chr18:53509265-53509958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 348
               

               
Conread position:
               
25-713
               

               
Cow position:
               
chr18:53525719-53526413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 372
               

               
Conread position:
               
29-734
               

               
Cow position:
               
chr18:55067080-55066368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
36-737
               

               
Cow position:
               
chr18:44398401-44397694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 197
               

               
Conread position:
               
36-743
               

               
Cow position:
               
chr18:42791842-42792555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 498
               

               
Conread position:
               
36-745
               

               
Cow position:
               
chr18:42837898-42837183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 428
               

               
Conread position:
               
36-746
               

               
Cow position:
               
chr18:53586961-53586245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
37-446
               

               
Cow position:
               
chr18:42744258-42743846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
37-724
               

               
Cow position:
               
chr18:51400236-51400928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
37-737
               

               
Cow position:
               
chr18:42675198-42674492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
86, 258
               

               
Conread position:
               
37-737
               

               
Cow position:
               
chr18:43175317-43174611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 280
               

               
Conread position:
               
39-587
               

               
Cow position:
               
chr18:49022688-49023241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
43-723
               

               
Cow position:
               
chr18:51812755-51812069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
43-743
               

               
Cow position:
               
chr18:51789848-51789142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
46-677
               

               
Cow position:
               
chr18:40306553-40307190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 156
               

               
Conread position:
               
47-723
               

               
Cow position:
               
chr18:42985511-42984829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
48-743
               

               
Cow position:
               
chr18:51368468-51367768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 437
               

               
Conread position:
               
49-613
               

               
Cow position:
               
chr18:50083669-50084239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
49-744
               

               
Cow position:
               
chr18:42693913-42693213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
52-695
               

               
Cow position:
               
chr18:50099281-50099930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 170
               

               
Conread position:
               
52-716
               

               
Cow position:
               
chr18:33064380-33063710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
53-734
               

               
Cow position:
               
chr18:49022617-49023304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
73, 171
               

               
Conread position:
               
53-746
               

               
Cow position:
               
chr18:40306308-40307007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
55-745
               

               
Cow position:
               
chr18:50848476-50849172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
70, 581
               

               
Conread position:
               
57-745
               

               
Cow position:
               
chr18:49033323-49032629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
62-722
               

               
Cow position:
               
chr18:42724608-42723942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 545
               

               
Conread position:
               
63-425
               

               
Cow position:
               
chr18:56267479-56267111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
63-737
               

               
Cow position:
               
chr18:42985327-42984647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
67, 230
               

               
Conread position:
               
63-745
               

               
Cow position:
               
chr18:52012460-52011774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
64-695
               

               
Cow position:
               
chr18:50083432-50084069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
64-705
               

               
Cow position:
               
chr18:50059305-50058659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
63, 322
               

               
Conread position:
               
64-745
               

               
Cow position:
               
chr18:43120257-43119570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 253
               

               
Conread position:
               
65-745
               

               
Cow position:
               
chr18:14454037-14453351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
66-705
               

               
Cow position:
               
chr18:42675337-42674693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
67-757
               

               
Cow position:
               
chr18:53525678-53526374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
70-622
               

               
Cow position:
               
chr18:33093118-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
81-722
               

               
Cow position:
               
chr18:50059624-50058977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 305
               

               
Conread position:
               
82-736
               

               
Cow position:
               
chr18:55067110-55066450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
100-736
               

               
Cow position:
               
chr18:42960281-42959648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 217
               

               
Conread position:
               
100-737
               

               
Cow position:
               
chr18:41949330-41948687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
104-704
               

               
Cow position:
               
chr18:53497994-53498600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
111, 104
               

               
Conread position:
               
130-738
               

               
Cow position:
               
chr18:53635657-53635046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 255
               

               
Conread position:
               
132-745
               

               
Cow position:
               
chr18:53636075-53635459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 98
               

               
Conread position:
               
134-411
               

               
Cow position:
               
chr18:56391931-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 94
               

               
Conread position:
               
134-745
               

               
Cow position:
               
chr18:55497651-55497037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 251
               

               
Conread position:
               
140-692
               

               
Cow position:
               
chr18:22844308-22843750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
142-661
               

               
Cow position:
               
chr18:43168023-43168545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
142-695
               

               
Cow position:
               
chr18:50031003-50030445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
163, 57
               

               
Conread position:
               
142-711
               

               
Cow position:
               
chr18:1417981-1418552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 158
               

               
Conread position:
               
143-745
               

               
Cow position:
               
chr18:56128101-56128706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
143-746
               

               
Cow position:
               
chr18:53610487-53609881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
144-536
               

               
Cow position:
               
chr18:50083851-50084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
223, 237
               

               
Conread position:
               
144-585
               

               
Cow position:
               
chr18:44397954-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 168
               

               
Conread position:
               
144-684
               

               
Cow position:
               
chr18:50271610-50272152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
313, 408
               

               
Conread position:
               
144-695
               

               
Cow position:
               
chr18:50246058-50246612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
153, 170
               

               
Conread position:
               
144-704
               

               
Cow position:
               
chr18:50099292-50099855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
149, 162
               

               
Conread position:
               
144-734
               

               
Cow position:
               
chr18:52447425-52448018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 55
               

               
Conread position:
               
144-745
               

               
Cow position:
               
chr18:50245974-50246578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
145-459
               

               
Cow position:
               
chr18:56247417-56247107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
145-694
               

               
Cow position:
               
chr18:51368284-51367733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
278, 284
               

               
Conread position:
               
145-737
               

               
Cow position:
               
chr18:44240075-44240670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
339, 505
               

               
Conread position:
               
145-737
               

               
Cow position:
               
chr18:52447678-52448273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
145-743
               

               
Cow position:
               
chr18:51789575-51788974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
229, 220
               

               
Conread position:
               
145-745
               

               
Cow position:
               
chr18:49022628-49023231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 553
               

               
Conread position:
               
145-745
               

               
Cow position:
               
chr18:56316115-56316718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 283
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr18:55442336-55442538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
146, 151
               

               
Conread position:
               
149-722
               

               
Cow position:
               
chr18:40074925-40075501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
151-695
               

               
Cow position:
               
chr18:50099467-50100014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
154-745
               

               
Cow position:
               
chr18:50059632-50059038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 152
               

               
Conread position:
               
155-794
               

               
Cow position:
               
chr18:50281752-50282393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 14
               

               
Conread position:
               
157-451
               

               
Cow position:
               
chr18:56267466-56267174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
280, 0
               

               
Conread position:
               
157-684
               

               
Cow position:
               
chr18:53586417-53585887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
299, 407
               

               
Conread position:
               
157-709
               

               
Cow position:
               
chr18:33064860-33064306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
219, 239
               

               
Conread position:
               
157-724
               

               
Cow position:
               
chr18:53509232-53509802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
304, 325
               

               
Conread position:
               
157-737
               

               
Cow position:
               
chr18:53586669-53586086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
221, 229
               

               
Conread position:
               
157-737
               

               
Cow position:
               
chr18:54993234-54993817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
157-743
               

               
Cow position:
               
chr18:51752340-51751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
157-746
               

               
Cow position:
               
chr18:53525686-53526278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
304, 325
               

               
Conread position:
               
157-757
               

               
Cow position:
               
chr18:55067116-55066512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
158-767
               

               
Cow position:
               
chr18:56493839-56494453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 72
               

               
Conread position:
               
163-459
               

               
Cow position:
               
chr18:14453204-14452908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
164-745
               

               
Cow position:
               
chr18:53610382-53609798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 0
               

               
Conread position:
               
164-770
               

               
Cow position:
               
chr18:49022313-49022922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
249, 259
               

               
Conread position:
               
166-372
               

               
Cow position:
               
chr18:22843514-22843308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
167-745
               

               
Cow position:
               
chr18:43175268-43174687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
171-716
               

               
Cow position:
               
chr18:40075031-40075579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
90, 82
               

               
Conread position:
               
172-672
               

               
Cow position:
               
chr18:50295365-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
289, 379
               

               
Conread position:
               
172-745
               

               
Cow position:
               
chr18:56391590-56391014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 301
               

               
Conread position:
               
178-745
               

               
Cow position:
               
chr18:53587068-53586498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
202, 197
               

               
Conread position:
               
186-744
               

               
Cow position:
               
chr18:56316072-56316633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 500
               

               
Conread position:
               
188-712
               

               
Cow position:
               
chr18:50049114-50048587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
190-737
               

               
Cow position:
               
chr18:44398412-44397862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
266, 291
               

               
Conread position:
               
196-708
               

               
Cow position:
               
chr18:42985527-42985012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
196-734
               

               
Cow position:
               
chr18:22844336-22843792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 108
               

               
Conread position:
               
212-745
               

               
Cow position:
               
chr18:51400245-51400781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
89, 102
               

               
Conread position:
               
218-587
               

               
Cow position:
               
chr18:56267489-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
195, 208
               

               
Conread position:
               
220-705
               

               
Cow position:
               
chr18:50271602-50272089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
238, 422
               

               
Conread position:
               
226-695
               

               
Cow position:
               
chr18:50059644-50059172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
236, 316
               

               
Conread position:
               
227-593
               

               
Cow position:
               
chr18:14453224-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
233, 0
               

               
Conread position:
               
227-732
               

               
Cow position:
               
chr18:56493992-56494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
250, 0
               

               
Conread position:
               
227-737
               

               
Cow position:
               
chr18:53559738-53560251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
227-737
               

               
Cow position:
               
chr18:53559822-53560335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
233, 327
               

               
Conread position:
               
228-680
               

               
Cow position:
               
chr18:42827469-42827924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
221, 290
               

               
Conread position:
               
228-745
               

               
Cow position:
               
chr18:33064873-33064353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
221, 307
               

               
Conread position:
               
228-745
               

               
Cow position:
               
chr18:40306234-40306754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
230, 470
               

               
Conread position:
               
229-707
               

               
Cow position:
               
chr18:40074921-40075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
209, 197
               

               
Conread position:
               
229-737
               

               
Cow position:
               
chr18:43022837-43022326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
229-743
               

               
Cow position:
               
chr18:51812734-51812217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
235, 337
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr18:42791702-42792221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
235, 0
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr18:50083432-50083951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
229-745
               

               
Cow position:
               
chr18:50848401-50848920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
229-746
               

               
Cow position:
               
chr18:43120257-43119737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
248, 421
               

               
Conread position:
               
229-760
               

               
Cow position:
               
chr18:42837786-42837252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
231-717
               

               
Cow position:
               
chr18:49033398-49032909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
224, 245
               

               
Conread position:
               
232-723
               

               
Cow position:
               
chr18:42985575-42985081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 82
               

               
Conread position:
               
232-737
               

               
Cow position:
               
chr18:42960314-42959806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
232-745
               

               
Cow position:
               
chr18:42675336-42674820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
233-717
               

               
Cow position:
               
chr18:1417988-1418475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
188, 180
               

               
Conread position:
               
234-593
               

               
Cow position:
               
chr18:43048741-43048379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
235-723
               

               
Cow position:
               
chr18:33093118-33092627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
140, 152
               

               
Conread position:
               
240-705
               

               
Cow position:
               
chr18:51765417-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
240-723
               

               
Cow position:
               
chr18:52447017-52447503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
241-746
               

               
Cow position:
               
chr18:53610473-53609965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 457
               

               
Conread position:
               
241-748
               

               
Cow position:
               
chr18:42791042-42791552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
242-745
               

               
Cow position:
               
chr18:33064943-33064437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
221, 313
               

               
Conread position:
               
250-695
               

               
Cow position:
               
chr18:42827407-42827855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
258-745
               

               
Cow position:
               
chr18:55497695-55497205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
259-737
               

               
Cow position:
               
chr18:53559686-53560167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
175, 165
               

               
Conread position:
               
264-768
               

               
Cow position:
               
chr18:42724821-42724314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
270-745
               

               
Cow position:
               
chr18:49021674-49022153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
208, 296
               

               
Conread position:
               
273-576
               

               
Cow position:
               
chr18:56391960-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
140, 146
               

               
Conread position:
               
274-737
               

               
Cow position:
               
chr18:40324857-40324391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
182, 429
               

               
Conread position:
               
274-745
               

               
Cow position:
               
chr18:42837909-42837435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
275-746
               

               
Cow position:
               
chr18:56267600-56267126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
308-745
               

               
Cow position:
               
chr18:49033405-49032965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
311-737
               

               
Cow position:
               
chr18:42985580-42985151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
145, 162
               

               
Conread position:
               
312-759
               

               
Cow position:
               
chr18:50295253-50295705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
317-745
               

               
Cow position:
               
chr18:1417988-1418419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 123
               

               
Conread position:
               
318-736
               

               
Cow position:
               
chr18:43048741-43048320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
336-745
               

               
Cow position:
               
chr18:33093101-33092689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 126
               

               
Conread position:
               
376-771
               

               
Cow position:
               
chr18:51812755-51812355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
387-745
               

               
Cow position:
               
chr18:40306225-40306586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 334
               

               
Conread position:
               
391-745
               

               
Cow position:
               
chr18:42675345-42674988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 144
               

               
Conread position:
               
393-746
               

               
Cow position:
               
chr18:53636066-53635710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
397-739
               

               
Cow position:
               
chr18:40074921-40075266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 192
               

               
Conread position:
               
397-745
               

               
Cow position:
               
chr18:50281740-50282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
73, 61
               

               
Conread position:
               
397-746
               

               
Cow position:
               
chr18:56128103-56128455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 289
               

               
Conread position:
               
433-743
               

               
Cow position:
               
chr18:41949330-41949017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
471-745
               

               
Cow position:
               
chr18:40074914-40075188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
471-745
               

               
Cow position:
               
chr18:56248182-56247910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
472-745
               

               
Cow position:
               
chr18:50059647-50059374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
232, 223
               

               
Conread position:
               
478-683
               

               
Cow position:
               
chr18:55442332-55442537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
490-745
               

               
Cow position:
               
chr18:53509232-53509487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.