Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8017B08.3 |
| Conread position: | 1-592 |
| Cow position: | chr19:23597116-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 1-696 |
| Cow position: | chr19:23649557-23650258 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 146 |
| Conread position: | 1-737 |
| Cow position: | chr19:23613435-23614177 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 422 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 128, 699 |
| Conread position: | 1-743 |
| Cow position: | chr19:23649305-23650053 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 89 |
| Conread position: | 1-744 |
| Cow position: | chr19:14940327-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-745 |
| Cow position: | chr19:14940159-14940909 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 561 |
| Conread position: | 1-745 |
| Cow position: | chr19:14940243-14940993 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 1-745 |
| Cow position: | chr19:20677870-20678620 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 421 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 124, 533 |
| Conread position: | 1-745 |
| Cow position: | chr19:23596951-23597698 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 79 |
| Conread position: | 1-745 |
| Cow position: | chr19:23613771-23614521 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 430 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 136, 115 |
| Conread position: | 1-745 |
| Cow position: | chr19:23649473-23650223 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 134 |
| Conread position: | 1-745 |
| Cow position: | chr19:23649641-23650391 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 148 |
| Conread position: | 1-745 |
| Cow position: | chr19:23649725-23650475 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 231 |
| Conread position: | 2-673 |
| Cow position: | chr19:14960387-14959714 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 398 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 117, 229 |
| Conread position: | 3-659 |
| Cow position: | chr19:23614445-23615107 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 393 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 122, 297 |
| Conread position: | 23-672 |
| Cow position: | chr19:23649831-23650486 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 292 |
| Conread position: | 25-745 |
| Cow position: | chr19:14940015-14940741 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 29-726 |
| Cow position: | chr19:14959539-14958852 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 420 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 35-707 |
| Cow position: | chr19:14960438-14959764 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 401 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 90, 289 |
| Conread position: | 37-380 |
| Cow position: | chr19:14948344-14947998 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 64-723 |
| Cow position: | chr19:23614170-23614835 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 392 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 62, 572 |
| Conread position: | 64-746 |
| Cow position: | chr19:20677597-20678285 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 399 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 243 |
| Conread position: | 64-756 |
| Cow position: | chr19:23614422-23615121 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 412 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 63, 138 |
| Conread position: | 72-592 |
| Cow position: | chr19:20635560-20635033 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 132 |
| Conread position: | 83-613 |
| Cow position: | chr19:20678120-20678656 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 347 |
| Conread position: | 155-671 |
| Cow position: | chr19:20635557-20635038 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 255, 246 |
| Conread position: | 163-744 |
| Cow position: | chr19:23649302-23649886 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 133 |
| Conread position: | 190-485 |
| Cow position: | chr19:14948356-14948058 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 111, 124 |
| Conread position: | 190-737 |
| Cow position: | chr19:14960448-14959900 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 234 |
| Conread position: | 227-734 |
| Cow position: | chr19:43570244-43569734 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 300 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 233, 243 |
| Conread position: | 229-629 |
| Cow position: | chr19:14948401-14947998 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 184, 190 |
| Conread position: | 229-745 |
| Cow position: | chr19:23596930-23597446 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 102 |
| Conread position: | 237-708 |
| Cow position: | chr19:20635644-20635169 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 299 |
| Conread position: | 242-753 |
| Cow position: | chr19:23649297-23649813 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 237 |
| Conread position: | 280-743 |
| Cow position: | chr19:23613381-23613847 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 182, 190 |
| Conread position: | 370-745 |
| Cow position: | chr19:14960352-14959976 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 376-665 |
| Cow position: | chr19:14959119-14958827 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 48 |
| Conread position: | 381-737 |
| Cow position: | chr19:14948416-14948058 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 12 |
| Conread position: | 400-745 |
| Cow position: | chr19:23596849-23597194 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 24 |
Show alignments to all cow chromosomes.