Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8017B08.3 |
| Conread position: | 1-399 |
| Cow position: | chr2:5874509-5874108 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-419 |
| Cow position: | chr2:82799947-82800368 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-626 |
| Cow position: | chr2:5874761-5874130 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 390 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 127, 421 |
| Conread position: | 1-671 |
| Cow position: | chr2:86465519-86466195 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 410 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-737 |
| Cow position: | chr2:82799611-82800353 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 1-739 |
| Cow position: | chr2:5875097-5874353 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 23-743 |
| Cow position: | chr2:5874907-5874181 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 123 |
| Conread position: | 25-696 |
| Cow position: | chr2:86465039-86465716 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 412 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 25-745 |
| Cow position: | chr2:82799551-82800277 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 76 |
| Conread position: | 36-745 |
| Cow position: | chr2:5875146-5874431 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 169 |
| Conread position: | 36-745 |
| Cow position: | chr2:82799478-82800193 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 271 |
| Conread position: | 144-340 |
| Cow position: | chr2:86466003-86466197 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 144-695 |
| Cow position: | chr2:78754895-78755448 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 154-731 |
| Cow position: | chr2:5874689-5874109 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 234 |
| Conread position: | 157-526 |
| Cow position: | chr2:48689465-48689094 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 319, 53 |
| Conread position: | 162-713 |
| Cow position: | chr2:48689625-48689075 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 346 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 299, 52 |
| Conread position: | 178-745 |
| Cow position: | chr2:5875169-5874599 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 353 |
| Conread position: | 190-745 |
| Cow position: | chr2:82799467-82800025 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 184 |
| Conread position: | 241-743 |
| Cow position: | chr2:78754824-78755329 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 124, 129 |
| Conread position: | 251-734 |
| Cow position: | chr2:5875180-5874694 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 175 |
| Conread position: | 478-746 |
| Cow position: | chr2:82799506-82799774 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 85 |
Show alignments to all cow chromosomes.