Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8017B08.3 |
| Conread position: | 1-338 |
| Cow position: | chr21:34222883-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 95, 99 |
| Conread position: | 1-421 |
| Cow position: | chr21:12608425-12608002 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 1-446 |
| Cow position: | chr21:34223051-34222603 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 95, 100 |
| Conread position: | 1-713 |
| Cow position: | chr21:12659337-12660055 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 394 |
| Conread position: | 1-744 |
| Cow position: | chr21:12659253-12660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 475 |
| Conread position: | 1-745 |
| Cow position: | chr21:12608761-12608011 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 394 |
| Conread position: | 1-745 |
| Cow position: | chr21:12658917-12659667 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-745 |
| Cow position: | chr21:12659001-12659751 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-745 |
| Cow position: | chr21:12659169-12659919 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 395 |
| Conread position: | 16-745 |
| Cow position: | chr21:12608914-12608179 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 23-744 |
| Cow position: | chr21:12608823-12608096 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 53-777 |
| Cow position: | chr21:12608625-12607898 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 342 |
| Conread position: | 55-744 |
| Cow position: | chr21:12658803-12659498 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 154 |
| Conread position: | 99-745 |
| Cow position: | chr21:12608915-12608263 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 178-762 |
| Cow position: | chr21:12608917-12608329 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 181-673 |
| Cow position: | chr21:34223036-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 477 |
| Conread position: | 313-745 |
| Cow position: | chr21:34223153-34222721 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 148, 80 |
| Conread position: | 385-745 |
| Cow position: | chr21:12658800-12659163 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 514-768 |
| Cow position: | chr21:34223036-34222780 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 146, 136 |
Show alignments to all cow chromosomes.