Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8017B08.3 |
| Conread position: | 1-296 |
| Cow position: | chr24:17077841-17077543 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-410 |
| Cow position: | chr24:17035370-17034958 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 316 |
| Conread position: | 1-414 |
| Cow position: | chr24:17070627-17071045 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 92 |
| Conread position: | 1-454 |
| Cow position: | chr24:17070543-17070999 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 272 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 133, 200 |
| Conread position: | 1-723 |
| Cow position: | chr24:17035706-17034978 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 430 |
| Conread position: | 1-723 |
| Cow position: | chr24:17036462-17035734 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 425 |
| Conread position: | 1-743 |
| Cow position: | chr24:17078345-17077597 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 533 |
| Conread position: | 1-745 |
| Cow position: | chr24:17035790-17035040 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 452 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 129, 367 |
| Conread position: | 1-745 |
| Cow position: | chr24:17036378-17035628 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 100 |
| Conread position: | 1-757 |
| Cow position: | chr24:17035874-17035111 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 25-598 |
| Cow position: | chr24:17070483-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 25-664 |
| Cow position: | chr24:17078153-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 177 |
| Conread position: | 37-745 |
| Cow position: | chr24:17036006-17035292 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 575 |
| Conread position: | 83-419 |
| Cow position: | chr24:17013162-17013501 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 100-745 |
| Cow position: | chr24:17036612-17035964 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 144-746 |
| Cow position: | chr24:17078283-17077678 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 290 |
| Conread position: | 212-745 |
| Cow position: | chr24:17070505-17071041 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 249, 261 |
| Conread position: | 247-745 |
| Cow position: | chr24:17070456-17070957 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 287 |
| Conread position: | 248-745 |
| Cow position: | chr24:17036548-17036048 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 0 |
| Conread position: | 433-745 |
| Cow position: | chr24:17013179-17013494 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 102 |
Show alignments to all cow chromosomes.