Cow genome map

Conread name: Ss1.1-Pig3-SRG8017B08.3

Conread position: 1-257
Cow position:
Alignm length: 263
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 95

Conread position: 1-383
Cow position:
Alignm length: 387
Alignm identity: 230
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 313

Conread position: 1-398
Cow position:
Alignm length: 401
Alignm identity: 257
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 130, 0

Conread position: 1-411
Cow position:
Alignm length: 415
Alignm identity: 251
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 397

Conread position: 1-411
Cow position:
Alignm length: 415
Alignm identity: 264
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 133, 395

Conread position: 1-414
Cow position:
Alignm length: 418
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 382

Conread position: 1-421
Cow position:
Alignm length: 424
Alignm identity: 254
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 1-424
Cow position:
Alignm length: 429
Alignm identity: 259
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 217

Conread position: 1-454
Cow position:
Alignm length: 458
Alignm identity: 274
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 314

Conread position: 1-459
Cow position:
Alignm length: 464
Alignm identity: 274
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 85

Conread position: 1-531
Cow position:
Alignm length: 538
Alignm identity: 320
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 380

Conread position: 1-577
Cow position:
Alignm length: 585
Alignm identity: 351
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 104, 92

Conread position: 1-583
Cow position:
Alignm length: 591
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 148

Conread position: 1-590
Cow position:
Alignm length: 596
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 1-621
Cow position:
Alignm length: 629
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 148

Conread position: 1-667
Cow position:
Alignm length: 674
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 484

Conread position: 1-673
Cow position:
Alignm length: 685
Alignm identity: 401
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 130, 0

Conread position: 1-680
Cow position:
Alignm length: 691
Alignm identity: 394
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 130, 351

Conread position: 1-682
Cow position:
Alignm length: 690
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 148

Conread position: 1-696
Cow position:
Alignm length: 702
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-722
Cow position:
Alignm length: 729
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 387

Conread position: 1-722
Cow position:
Alignm length: 728
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 1-743
Cow position:
Alignm length: 753
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 130

Conread position: 1-744
Cow position:
Alignm length: 752
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 425

Conread position: 1-745
Cow position:
Alignm length: 754
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 232

Conread position: 1-745
Cow position:
Alignm length: 753
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 148

Conread position: 1-745
Cow position:
Alignm length: 752
Alignm identity: 444
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 122, 600

Conread position: 1-746
Cow position:
Alignm length: 753
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 724

Conread position: 1-746
Cow position:
Alignm length: 751
Alignm identity: 434
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 312, 94

Conread position: 1-974
Cow position:
Alignm length: 983
Alignm identity: 762
Alignm E-value: 0
Alignm gaps (pig, cow): 794, 850

Conread position: 2-667
Cow position:
Alignm length: 678
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 147

Conread position: 2-745
Cow position:
Alignm length: 757
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 182

Conread position: 3-424
Cow position:
Alignm length: 425
Alignm identity: 269
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 128, 408

Conread position: 3-598
Cow position:
Alignm length: 604
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 294

Conread position: 7-744
Cow position:
Alignm length: 744
Alignm identity: 438
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 339

Conread position: 14-342
Cow position:
Alignm length: 334
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 16-745
Cow position:
Alignm length: 743
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 84

Conread position: 23-696
Cow position:
Alignm length: 682
Alignm identity: 404
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 100, 278

Conread position: 23-745
Cow position:
Alignm length: 733
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 126

Conread position: 24-446
Cow position:
Alignm length: 428
Alignm identity: 270
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 72

Conread position: 25-338
Cow position:
Alignm length: 319
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 124

Conread position: 25-414
Cow position:
Alignm length: 396
Alignm identity: 241
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 133

Conread position: 25-454
Cow position:
Alignm length: 434
Alignm identity: 260
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 113

Conread position: 25-744
Cow position:
Alignm length: 731
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 197

Conread position: 29-745
Cow position:
Alignm length: 723
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 35-585
Cow position:
Alignm length: 559
Alignm identity: 340
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 62

Conread position: 37-748
Cow position:
Alignm length: 720
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 393

Conread position: 45-676
Cow position:
Alignm length: 639
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 48-335
Cow position:
Alignm length: 291
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 11

Conread position: 49-760
Cow position:
Alignm length: 723
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 268

Conread position: 66-745
Cow position:
Alignm length: 689
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 68

Conread position: 70-661
Cow position:
Alignm length: 603
Alignm identity: 364
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 8, 28

Conread position: 74-720
Cow position:
Alignm length: 659
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 76-745
Cow position:
Alignm length: 682
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 96-434
Cow position:
Alignm length: 342
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 129-745
Cow position:
Alignm length: 622
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 262

Conread position: 130-537
Cow position:
Alignm length: 415
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 165, 174

Conread position: 132-733
Cow position:
Alignm length: 607
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 169

Conread position: 134-449
Cow position:
Alignm length: 316
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 138-745
Cow position:
Alignm length: 612
Alignm identity: 362
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 166, 152

Conread position: 144-759
Cow position:
Alignm length: 625
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 170

Conread position: 145-716
Cow position:
Alignm length: 577
Alignm identity: 349
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 311, 69

Conread position: 150-421
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 69

Conread position: 154-454
Cow position:
Alignm length: 302
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 157-505
Cow position:
Alignm length: 354
Alignm identity: 225
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 58

Conread position: 157-563
Cow position:
Alignm length: 411
Alignm identity: 257
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 319, 374

Conread position: 157-638
Cow position:
Alignm length: 485
Alignm identity: 299
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 299, 0

Conread position: 161-722
Cow position:
Alignm length: 566
Alignm identity: 343
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 287, 321

Conread position: 162-704
Cow position:
Alignm length: 546
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 191

Conread position: 162-747
Cow position:
Alignm length: 590
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 564

Conread position: 163-596
Cow position:
Alignm length: 434
Alignm identity: 278
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 275, 0

Conread position: 163-733
Cow position:
Alignm length: 576
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 181

Conread position: 164-537
Cow position:
Alignm length: 377
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 294, 0

Conread position: 166-569
Cow position:
Alignm length: 407
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 289, 0

Conread position: 168-743
Cow position:
Alignm length: 580
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 62

Conread position: 170-744
Cow position:
Alignm length: 578
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 173-734
Cow position:
Alignm length: 566
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 178-744
Cow position:
Alignm length: 572
Alignm identity: 352
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 37

Conread position: 180-625
Cow position:
Alignm length: 452
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 216, 211

Conread position: 180-745
Cow position:
Alignm length: 572
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 181-744
Cow position:
Alignm length: 564
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 189-669
Cow position:
Alignm length: 485
Alignm identity: 292
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 275, 188

Conread position: 226-745
Cow position:
Alignm length: 523
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 229-660
Cow position:
Alignm length: 439
Alignm identity: 280
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 219, 238

Conread position: 229-672
Cow position:
Alignm length: 448
Alignm identity: 271
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 234, 392

Conread position: 238-587
Cow position:
Alignm length: 354
Alignm identity: 218
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 238-716
Cow position:
Alignm length: 484
Alignm identity: 300
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 13, 202

Conread position: 252-674
Cow position:
Alignm length: 427
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 54

Conread position: 252-745
Cow position:
Alignm length: 499
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 168

Conread position: 255-745
Cow position:
Alignm length: 498
Alignm identity: 308
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 143, 137

Conread position: 264-695
Cow position:
Alignm length: 437
Alignm identity: 259
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 209, 194

Conread position: 265-626
Cow position:
Alignm length: 367
Alignm identity: 230
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 193, 215

Conread position: 274-723
Cow position:
Alignm length: 456
Alignm identity: 288
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 200, 187

Conread position: 285-745
Cow position:
Alignm length: 465
Alignm identity: 284
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 180, 412

Conread position: 330-745
Cow position:
Alignm length: 420
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 236

Conread position: 333-737
Cow position:
Alignm length: 409
Alignm identity: 259
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 90, 96

Conread position: 339-698
Cow position:
Alignm length: 364
Alignm identity: 224
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 119, 226

Conread position: 349-723
Cow position:
Alignm length: 378
Alignm identity: 234
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 109, 9

Conread position: 358-745
Cow position:
Alignm length: 391
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 405-745
Cow position:
Alignm length: 345
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 319

Conread position: 407-762
Cow position:
Alignm length: 362
Alignm identity: 231
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 25

Conread position: 408-744
Cow position:
Alignm length: 342
Alignm identity: 222
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 8, 52

Conread position: 415-678
Cow position:
Alignm length: 269
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 43

Conread position: 421-745
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 7

Conread position: 427-660
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 439-745
Cow position:
Alignm length: 310
Alignm identity: 192
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 473-744
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 478-744
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 124

Conread position: 478-745
Cow position:
Alignm length: 268
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 487-746
Cow position:
Alignm length: 261
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 501-745
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.