Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8017B08.3 |
| Conread position: | 1-258 |
| Cow position: | chr28:33210396-33210657 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 99 |
| Conread position: | 1-454 |
| Cow position: | chr28:7757836-7758292 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 120, 421 |
| Conread position: | 1-503 |
| Cow position: | chr28:9253103-9253613 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 130, 421 |
| Conread position: | 1-661 |
| Cow position: | chr28:34695912-34696578 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 1-727 |
| Cow position: | chr28:7758088-7758804 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 412 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 61, 57 |
| Conread position: | 1-743 |
| Cow position: | chr28:7757416-7758164 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 201 |
| Conread position: | 1-762 |
| Cow position: | chr28:11334137-11333374 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 455 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 16-587 |
| Cow position: | chr28:9253034-9253611 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 36-760 |
| Cow position: | chr28:34695863-34696592 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 125 |
| Conread position: | 37-745 |
| Cow position: | chr28:7757368-7758082 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 392 |
| Conread position: | 43-661 |
| Cow position: | chr28:7757710-7758334 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 367 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 593 |
| Conread position: | 144-446 |
| Cow position: | chr28:33210290-33210593 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 144-745 |
| Cow position: | chr28:7810326-7810921 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 269, 215 |
| Conread position: | 156-745 |
| Cow position: | chr28:9252924-9253517 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 173-748 |
| Cow position: | chr28:9253026-9253604 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 354 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 132, 126 |
| Conread position: | 189-770 |
| Cow position: | chr28:34695851-34696437 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 137 |
| Conread position: | 190-591 |
| Cow position: | chr28:33210252-33210657 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 218-737 |
| Cow position: | chr28:9298620-9299137 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 47 |
| Conread position: | 218-745 |
| Cow position: | chr28:9290056-9290580 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 229-626 |
| Cow position: | chr28:9290233-9290629 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 280-674 |
| Cow position: | chr28:33210258-33210656 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 317-745 |
| Cow position: | chr28:11334154-11333723 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 102, 95 |
| Conread position: | 368-722 |
| Cow position: | chr28:33210262-33210620 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 477-745 |
| Cow position: | chr28:33210290-33210558 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 202, 206 |
| Conread position: | 514-745 |
| Cow position: | chr28:33210243-33210474 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 523-745 |
| Cow position: | chr28:7810288-7810510 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.