Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8017B08.3 |
| Conread position: | 1-672 |
| Cow position: | chr6:49396293-49396970 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 225 |
| Conread position: | 1-724 |
| Cow position: | chr6:49428480-49429209 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 1-727 |
| Cow position: | chr6:49428816-49429546 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 400 |
| Conread position: | 1-743 |
| Cow position: | chr6:49340488-49341236 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 471 |
| Conread position: | 1-744 |
| Cow position: | chr6:49428732-49429481 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 399 |
| Conread position: | 1-745 |
| Cow position: | chr6:49340404-49341154 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-745 |
| Cow position: | chr6:49428312-49429062 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 160 |
| Conread position: | 1-745 |
| Cow position: | chr6:49428396-49429146 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-771 |
| Cow position: | chr6:49428648-49429426 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 400 |
| Conread position: | 3-440 |
| Cow position: | chr6:49396547-49396987 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 217 |
| Conread position: | 23-734 |
| Cow position: | chr6:49428250-49428967 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 24-746 |
| Cow position: | chr6:49396232-49396960 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 202 |
| Conread position: | 37-599 |
| Cow position: | chr6:49340860-49341428 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 90, 501 |
| Conread position: | 157-623 |
| Cow position: | chr6:49362330-49362787 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 163-694 |
| Cow position: | chr6:49362096-49362618 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 132, 151 |
| Conread position: | 163-707 |
| Cow position: | chr6:49428224-49428772 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 185-768 |
| Cow position: | chr6:49396150-49396732 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 366 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 189-717 |
| Cow position: | chr6:49362038-49362557 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 212-733 |
| Cow position: | chr6:49428190-49428714 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 291-737 |
| Cow position: | chr6:49340361-49340810 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 478-745 |
| Cow position: | chr6:49428291-49428558 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 501-745 |
| Cow position: | chr6:49428230-49428474 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 191, 184 |
Show alignments to all cow chromosomes.