Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8019N06.5 |
| Conread position: | 101-398 |
| Cow position: | chr11:59702741-59702455 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 121-218 |
| Cow position: | chr11:58186074-58185977 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-397 |
| Cow position: | chr11:30597233-30596963 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 135-400 |
| Cow position: | chr11:83578958-83579209 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 136-268 |
| Cow position: | chr11:36128677-36128545 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-268 |
| Cow position: | chr11:77470276-77470408 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-269 |
| Cow position: | chr11:58111757-58111889 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 136-275 |
| Cow position: | chr11:16796693-16796557 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 136-334 |
| Cow position: | chr11:80601140-80600951 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 170, 66 |
| Conread position: | 136-360 |
| Cow position: | chr11:70513803-70513595 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 136-369 |
| Cow position: | chr11:56895745-56895976 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 165, 70 |
| Conread position: | 136-375 |
| Cow position: | chr11:36849144-36848909 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 166, 83 |
| Conread position: | 136-396 |
| Cow position: | chr11:23137839-23138083 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 166, 35 |
| Conread position: | 136-397 |
| Cow position: | chr11:62778674-62778414 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 54 |
| Conread position: | 137-290 |
| Cow position: | chr11:69294954-69295115 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 137-381 |
| Cow position: | chr11:37982362-37982592 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 166, 69 |
| Conread position: | 137-392 |
| Cow position: | chr11:79018824-79019084 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 137-396 |
| Cow position: | chr11:53512313-53512058 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 72 |
| Conread position: | 138-374 |
| Cow position: | chr11:34623399-34623167 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 81 |
| Conread position: | 141-401 |
| Cow position: | chr11:10363166-10363420 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 158, 83 |
| Conread position: | 144-229 |
| Cow position: | chr11:56351439-56351524 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 75 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-255 |
| Cow position: | chr11:5607658-5607547 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-255 |
| Cow position: | chr11:48932410-48932520 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 144-260 |
| Cow position: | chr11:70837662-70837778 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 114, 66 |
| Conread position: | 144-290 |
| Cow position: | chr11:65676362-65676500 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 144-332 |
| Cow position: | chr11:17991405-17991216 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 144-396 |
| Cow position: | chr11:62609818-62609575 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 23 |
| Conread position: | 144-398 |
| Cow position: | chr11:34693056-34692822 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 228, 40 |
| Conread position: | 144-404 |
| Cow position: | chr11:48272424-48272163 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 160, 80 |
| Conread position: | 145-274 |
| Cow position: | chr11:21816856-21816984 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 145-304 |
| Cow position: | chr11:41451800-41451954 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 149-268 |
| Cow position: | chr11:17968451-17968574 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 149-387 |
| Cow position: | chr11:68975362-68975124 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 151-397 |
| Cow position: | chr11:61958522-61958774 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 82, 149 |
| Conread position: | 153-398 |
| Cow position: | chr11:18588369-18588617 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 97, 76 |
| Conread position: | 199-397 |
| Cow position: | chr11:66518655-66518461 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 174, 75 |
| Conread position: | 200-397 |
| Cow position: | chr11:4652803-4653003 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 200-397 |
| Cow position: | chr11:69307675-69307483 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 201-364 |
| Cow position: | chr11:6156166-6156330 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 204-397 |
| Cow position: | chr11:46427242-46427438 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 205-381 |
| Cow position: | chr11:65842912-65843088 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 205-385 |
| Cow position: | chr11:30804970-30805149 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 47 |
| Conread position: | 208-397 |
| Cow position: | chr11:71168428-71168620 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 215-397 |
| Cow position: | chr11:5789744-5789930 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 217-395 |
| Cow position: | chr11:64867868-64868049 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 217-397 |
| Cow position: | chr11:71341319-71341495 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 221-389 |
| Cow position: | chr11:72375527-72375705 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 224-347 |
| Cow position: | chr11:5200438-5200558 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 224-397 |
| Cow position: | chr11:58938599-58938775 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 31 |
| Conread position: | 224-397 |
| Cow position: | chr11:70826095-70825918 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 151 |
| Conread position: | 224-398 |
| Cow position: | chr11:80761232-80761408 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 225-397 |
| Cow position: | chr11:22747184-22747358 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 146 |
| Conread position: | 226-393 |
| Cow position: | chr11:70277970-70278139 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 228-397 |
| Cow position: | chr11:56290654-56290481 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 233-398 |
| Cow position: | chr11:3740091-3739922 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 241-397 |
| Cow position: | chr11:29946784-29946944 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 242-387 |
| Cow position: | chr11:84775202-84775054 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 243-397 |
| Cow position: | chr11:71501005-71501162 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 243-398 |
| Cow position: | chr11:2344379-2344219 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 244-367 |
| Cow position: | chr11:4436874-4436748 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 244-396 |
| Cow position: | chr11:35363607-35363452 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 244-396 |
| Cow position: | chr11:61454390-61454543 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 109 |
| Conread position: | 244-397 |
| Cow position: | chr11:6633837-6633680 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 244-397 |
| Cow position: | chr11:15373966-15373808 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 244-397 |
| Cow position: | chr11:16906924-16907079 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 109 |
| Conread position: | 244-397 |
| Cow position: | chr11:17831094-17831251 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 244-397 |
| Cow position: | chr11:34963196-34963040 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 105 |
| Conread position: | 244-397 |
| Cow position: | chr11:40478725-40478883 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 244-397 |
| Cow position: | chr11:63909540-63909694 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 107 |
| Conread position: | 244-398 |
| Cow position: | chr11:27932409-27932244 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 244-398 |
| Cow position: | chr11:58173751-58173594 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 102 |
| Conread position: | 245-387 |
| Cow position: | chr11:46884499-46884353 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 245-392 |
| Cow position: | chr11:48650098-48649947 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 245-392 |
| Cow position: | chr11:64351666-64351816 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 245-392 |
| Cow position: | chr11:73983878-73984029 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 245-395 |
| Cow position: | chr11:2084269-2084115 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 245-396 |
| Cow position: | chr11:44017100-44016945 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 245-397 |
| Cow position: | chr11:63919928-63920084 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 246-395 |
| Cow position: | chr11:67312905-67312752 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 246-397 |
| Cow position: | chr11:47837444-47837290 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 247-391 |
| Cow position: | chr11:33753788-33753929 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 247-391 |
| Cow position: | chr11:47784898-47784750 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 247-398 |
| Cow position: | chr11:35351917-35352070 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 127 |
| Conread position: | 248-397 |
| Cow position: | chr11:29786376-29786529 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 248-397 |
| Cow position: | chr11:48474828-48474673 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 249-398 |
| Cow position: | chr11:6202564-6202411 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 250-367 |
| Cow position: | chr11:63847965-63847847 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 250-376 |
| Cow position: | chr11:16796346-16796215 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 250-387 |
| Cow position: | chr11:17517519-17517378 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 250-396 |
| Cow position: | chr11:13592856-13592706 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 250-397 |
| Cow position: | chr11:53778737-53778586 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 251-397 |
| Cow position: | chr11:82289698-82289552 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 251-398 |
| Cow position: | chr11:54334448-54334297 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 252-396 |
| Cow position: | chr11:30708622-30708477 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 252-397 |
| Cow position: | chr11:6233761-6233910 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 252-397 |
| Cow position: | chr11:18508912-18509061 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-397 |
| Cow position: | chr11:26143977-26144126 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-397 |
| Cow position: | chr11:34136359-34136213 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 123 |
| Conread position: | 252-397 |
| Cow position: | chr11:62889775-62889924 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 252-397 |
| Cow position: | chr11:63435639-63435491 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 101 |
| Conread position: | 252-397 |
| Cow position: | chr11:65826632-65826781 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 252-398 |
| Cow position: | chr11:7560118-7559968 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-398 |
| Cow position: | chr11:19591876-19592024 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 123 |
| Conread position: | 252-398 |
| Cow position: | chr11:29659679-29659528 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 252-398 |
| Cow position: | chr11:32254099-32254248 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 252-398 |
| Cow position: | chr11:37804435-37804585 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-398 |
| Cow position: | chr11:46747742-46747892 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 252-398 |
| Cow position: | chr11:53717691-53717838 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 252-398 |
| Cow position: | chr11:71868484-71868634 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-399 |
| Cow position: | chr11:8683961-8684113 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 252-401 |
| Cow position: | chr11:38236370-38236217 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 253-391 |
| Cow position: | chr11:60470081-60470216 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 253-397 |
| Cow position: | chr11:62168214-62168361 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 254-367 |
| Cow position: | chr11:60720339-60720455 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 254-394 |
| Cow position: | chr11:78820266-78820124 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 254-398 |
| Cow position: | chr11:62811413-62811266 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 255-367 |
| Cow position: | chr11:59916261-59916146 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 255-371 |
| Cow position: | chr11:71767717-71767598 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 256-397 |
| Cow position: | chr11:13043031-13043176 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 258-398 |
| Cow position: | chr11:1067327-1067471 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 260-367 |
| Cow position: | chr11:63485046-63484938 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 260-378 |
| Cow position: | chr11:49149161-49149038 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 260-391 |
| Cow position: | chr11:35669842-35669976 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 260-398 |
| Cow position: | chr11:19247089-19247230 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 262-405 |
| Cow position: | chr11:77745142-77745289 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 139 |
| Conread position: | 263-397 |
| Cow position: | chr11:39462731-39462593 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 263-397 |
| Cow position: | chr11:49153054-49152919 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 264-401 |
| Cow position: | chr11:16719352-16719211 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 266-397 |
| Cow position: | chr11:9270622-9270755 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 270-397 |
| Cow position: | chr11:30638849-30638980 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 272-387 |
| Cow position: | chr11:15682881-15683000 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 272-395 |
| Cow position: | chr11:30925253-30925128 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 272-395 |
| Cow position: | chr11:43914390-43914263 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 272-400 |
| Cow position: | chr11:20602325-20602194 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 273-397 |
| Cow position: | chr11:41985948-41986076 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 273-398 |
| Cow position: | chr11:27913382-27913253 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 275-397 |
| Cow position: | chr11:13500111-13499987 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 100 |
| Conread position: | 275-397 |
| Cow position: | chr11:39250067-39249942 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 278-392 |
| Cow position: | chr11:32782791-32782909 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 279-395 |
| Cow position: | chr11:36987041-36986921 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 283-396 |
| Cow position: | chr11:48512251-48512135 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 293-397 |
| Cow position: | chr11:34106592-34106700 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.