Cow genome map

Conread name: Ss1.1-Pig3-SRG8019N06.5

Conread position: 101-398
Cow position:
Alignm length: 303
Alignm identity: 200
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 108

Conread position: 121-218
Cow position:
Alignm length: 98
Alignm identity: 81
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 123-397
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 18

Conread position: 135-400
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 43

Conread position: 136-268
Cow position:
Alignm length: 133
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 136-268
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 136-269
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 136-275
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 136-334
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 170, 66

Conread position: 136-360
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 84

Conread position: 136-369
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 165, 70

Conread position: 136-375
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 166, 83

Conread position: 136-396
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 166, 35

Conread position: 136-397
Cow position:
Alignm length: 266
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 54

Conread position: 137-290
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 137-381
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 166, 69

Conread position: 137-392
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 110

Conread position: 137-396
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 72

Conread position: 138-374
Cow position:
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 81

Conread position: 141-401
Cow position:
Alignm length: 265
Alignm identity: 176
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 158, 83

Conread position: 144-229
Cow position:
Alignm length: 86
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 144-255
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 144-255
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 144-260
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 114, 66

Conread position: 144-290
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 144-332
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 162, 74

Conread position: 144-396
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 162, 23

Conread position: 144-398
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 228, 40

Conread position: 144-404
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 160, 80

Conread position: 145-274
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 145-304
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 149-268
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 149-387
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 72

Conread position: 151-397
Cow position:
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 82, 149

Conread position: 153-398
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 97, 76

Conread position: 199-397
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 174, 75

Conread position: 200-397
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 25

Conread position: 200-397
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 17

Conread position: 201-364
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 46

Conread position: 204-397
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 9

Conread position: 205-381
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 23

Conread position: 205-385
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 47

Conread position: 208-397
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 215-397
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 217-395
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 61

Conread position: 217-397
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 50

Conread position: 221-389
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 23

Conread position: 224-347
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 224-397
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 31

Conread position: 224-397
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 151

Conread position: 224-398
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 8

Conread position: 225-397
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 146

Conread position: 226-393
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 12

Conread position: 228-397
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 233-398
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 11

Conread position: 241-397
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 15

Conread position: 242-387
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 55

Conread position: 243-397
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 36

Conread position: 243-398
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 33

Conread position: 244-367
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 244-396
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 45

Conread position: 244-396
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 109

Conread position: 244-397
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 244-397
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 244-397
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 109

Conread position: 244-397
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 125

Conread position: 244-397
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 105

Conread position: 244-397
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 244-397
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 107

Conread position: 244-398
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 39

Conread position: 244-398
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 102

Conread position: 245-387
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 245-392
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 245-392
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 7

Conread position: 245-392
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 50

Conread position: 245-395
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 245-396
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 245-397
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 246-395
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 246-397
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 247-391
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 63

Conread position: 247-391
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 247-398
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 127

Conread position: 248-397
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 20

Conread position: 248-397
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 249-398
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 18

Conread position: 250-367
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 40

Conread position: 250-376
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 250-387
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 250-396
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 250-397
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 251-397
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 108

Conread position: 251-398
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 252-396
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 66

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 252-397
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 123

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 101

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 252-398
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 123

Conread position: 252-398
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 30

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 11

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 252-399
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 252-401
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 253-391
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 36

Conread position: 253-397
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 53, 44

Conread position: 254-367
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 254-394
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 43

Conread position: 254-398
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 255-367
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 26

Conread position: 255-371
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 256-397
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 258-398
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 260-367
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 19

Conread position: 260-378
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 260-391
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 260-398
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 91

Conread position: 262-405
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 139

Conread position: 263-397
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 263-397
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 12

Conread position: 264-401
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 85

Conread position: 266-397
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 95

Conread position: 270-397
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 272-387
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 272-395
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 272-395
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 272-400
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 54

Conread position: 273-397
Cow position:
Alignm length: 129
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 273-398
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 275-397
Cow position:
Alignm length: 126
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 100

Conread position: 275-397
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 278-392
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 279-395
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 283-396
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 83

Conread position: 293-397
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.