Cow genome map

Conread name: Ss1.1-Pig3-SRG8019N06.5

Conread position: 122-367
Cow position: chr14:4044208-4044461 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 124-397
Cow position: chr14:26097931-26097638 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 126-239
Cow position: chr14:26258512-26258398 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 127-387
Cow position: chr14:4209287-4209551 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 179, 0

Conread position: 135-219
Cow position: chr14:32754391-32754307 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 76
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 136-297
Cow position: chr14:49767049-49767203 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 52

Conread position: 136-367
Cow position: chr14:29631742-29631955 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 137-258
Cow position: chr14:42435344-42435462 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 137-339
Cow position: chr14:4357053-4356855 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 168, 79

Conread position: 137-397
Cow position: chr14:18763624-18763383 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 236, 83

Conread position: 139-348
Cow position: chr14:25675424-25675222 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 67

Conread position: 144-378
Cow position: chr14:46125475-46125235 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 38

Conread position: 144-390
Cow position: chr14:22582971-22583197 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 157, 42

Conread position: 144-395
Cow position: chr14:37155692-37155930 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 162, 61

Conread position: 144-398
Cow position: chr14:17238150-17238408 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 125, 0

Conread position: 144-398
Cow position: chr14:18657800-18657552 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 171, 63

Conread position: 150-365
Cow position: chr14:32470207-32470427 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 124, 213

Conread position: 151-398
Cow position: chr14:44257739-44257979 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 82

Conread position: 169-397
Cow position: chr14:25824511-25824750 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 134

Conread position: 186-392
Cow position: chr14:1868541-1868333 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 6

Conread position: 205-382
Cow position: chr14:42276485-42276663 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 41

Conread position: 214-392
Cow position: chr14:28306715-28306891 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 39

Conread position: 221-370
Cow position: chr14:20070947-20071098 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 21

Conread position: 221-379
Cow position: chr14:42440034-42439872 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 23

Conread position: 221-391
Cow position: chr14:27076853-27077026 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 23

Conread position: 223-395
Cow position: chr14:42436902-42437076 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 149

Conread position: 225-389
Cow position: chr14:25611365-25611533 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 53

Conread position: 226-398
Cow position: chr14:31138860-31138685 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 55

Conread position: 231-397
Cow position: chr14:19129391-19129561 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 241-395
Cow position: chr14:10609576-10609733 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 11

Conread position: 242-397
Cow position: chr14:16340894-16341047 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 26

Conread position: 243-395
Cow position: chr14:10691729-10691573 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 30

Conread position: 244-382
Cow position: chr14:37436813-37436670 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 244-397
Cow position: chr14:18350958-18350802 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 19

Conread position: 244-397
Cow position: chr14:22997680-22997522 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 52

Conread position: 244-397
Cow position: chr14:37884018-37883861 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 244-398
Cow position: chr14:10078165-10078324 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 244-398
Cow position: chr14:28003865-28004022 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 132

Conread position: 244-398
Cow position: chr14:45577194-45577036 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 245-370
Cow position: chr14:25073024-25073152 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 44

Conread position: 245-395
Cow position: chr14:12035310-12035460 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 33

Conread position: 245-397
Cow position: chr14:24981362-24981510 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 30

Conread position: 245-397
Cow position: chr14:38144208-38144052 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 246-370
Cow position: chr14:27303558-27303685 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 246-398
Cow position: chr14:42419373-42419217 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 247-397
Cow position: chr14:33830207-33830356 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 30

Conread position: 249-367
Cow position: chr14:14280135-14280256 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 249-396
Cow position: chr14:1708753-1708602 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 126

Conread position: 249-398
Cow position: chr14:30756747-30756899 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 98

Conread position: 250-397
Cow position: chr14:8923679-8923529 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 31

Conread position: 250-397
Cow position: chr14:11056825-11056678 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 12

Conread position: 250-398
Cow position: chr14:34775840-34775690 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 16

Conread position: 251-397
Cow position: chr14:3943645-3943495 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 252-371
Cow position: chr14:18270269-18270389 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 14

Conread position: 252-390
Cow position: chr14:4227316-4227174 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 252-391
Cow position: chr14:50362700-50362843 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 252-392
Cow position: chr14:44713325-44713469 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 252-397
Cow position: chr14:7036451-7036302 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 252-397
Cow position: chr14:15428384-15428533 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 252-397
Cow position: chr14:20712781-20712637 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 82

Conread position: 252-398
Cow position: chr14:7198404-7198554 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 253-377
Cow position: chr14:8083106-8083232 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 30

Conread position: 253-397
Cow position: chr14:35503267-35503417 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 253-397
Cow position: chr14:50146786-50146934 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 82

Conread position: 253-398
Cow position: chr14:29590701-29590552 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 253-398
Cow position: chr14:45045506-45045654 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 254-396
Cow position: chr14:22916382-22916237 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 71

Conread position: 254-397
Cow position: chr14:22941822-22941673 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 255-376
Cow position: chr14:24785567-24785694 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 256-392
Cow position: chr14:19618841-19618701 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 41

Conread position: 256-398
Cow position: chr14:5222372-5222235 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 117, 22

Conread position: 256-399
Cow position: chr14:20245259-20245112 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 257-397
Cow position: chr14:28924079-28924223 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 258-397
Cow position: chr14:27733519-27733657 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 55

Conread position: 260-391
Cow position: chr14:18309391-18309258 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 19

Conread position: 260-397
Cow position: chr14:6541812-6541669 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 260-397
Cow position: chr14:12244471-12244329 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 0

Conread position: 260-397
Cow position: chr14:12954468-12954330 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 260-397
Cow position: chr14:40754333-40754192 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 260-398
Cow position: chr14:16237602-16237456 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 260-398
Cow position: chr14:18941373-18941230 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 71

Conread position: 260-399
Cow position: chr14:5630077-5630219 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 23

Conread position: 261-392
Cow position: chr14:48496229-48496097 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 70

Conread position: 267-397
Cow position: chr14:19863513-19863378 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 272-397
Cow position: chr14:46997965-46998094 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 272-412
Cow position: chr14:21406784-21406640 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 273-383
Cow position: chr14:26456300-26456414 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 30, 0

Conread position: 275-397
Cow position: chr14:15039684-15039559 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 102

Conread position: 278-397
Cow position: chr14:33309571-33309448 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Show alignments to all cow chromosomes.