Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8019N06.5
        

               Conread position:
               117-364
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               198, 34
               

               Conread position:
               135-398
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               156, 114
               

               Conread position:
               136-257
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               136-263
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 125
               

               Conread position:
               136-395
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               137, 38
               

               Conread position:
               136-397
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               166, 34
               

               Conread position:
               137-373
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               137-395
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               141-249
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-397
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               165, 30
               

               Conread position:
               144-285
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               144-383
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               144-395
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               162, 61
               

               Conread position:
               144-398
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               225, 27
               

               Conread position:
               144-398
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               158, 75
               

               Conread position:
               144-398
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               144-401
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               162, 75
               

               Conread position:
               146-397
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               160, 28
               

               Conread position:
               190-392
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 27
               

               Conread position:
               199-392
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               200-383
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               200-397
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               200-397
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               200-397
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               208-397
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               222-392
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               224-397
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               227-397
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               233-396
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               237-382
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               238-397
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               240-392
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               240-397
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               240-397
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               240-398
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               244-371
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               244-387
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               244-387
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               244-395
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               244-396
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               244-398
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               245-396
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               245-397
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               246-385
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               246-391
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               246-392
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               246-395
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               246-396
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               246-399
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               247-390
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               248-398
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               249-366
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               249-398
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               250-371
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               250-396
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               250-397
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               250-397
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               250-401
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               251-388
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 38
               

               Conread position:
               251-396
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               57, 104
               

               Conread position:
               252-371
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               252-392
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               56, 116
               

               Conread position:
               252-395
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               252-396
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               252-396
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               252-396
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               252-397
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               252-397
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               252-397
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               252-397
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               252-397
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               50, 26
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               252-401
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               252-425
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               253-371
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               253-397
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               254-397
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 133
               

               Conread position:
               254-397
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               256-397
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               258-396
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               115, 50
               

               Conread position:
               258-397
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               259-396
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               260-371
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               260-390
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               260-398
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               260-398
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               261-397
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               262-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               263-397
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               266-398
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               267-392
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               268-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               272-397
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               272-397
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               278-398
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.