Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8019N06.5
        

               Conread position:
               115-351
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               191, 29
               

               Conread position:
               126-397
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               127-312
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 153
               

               Conread position:
               128-328
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               148, 161
               

               Conread position:
               133-336
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 143
               

               Conread position:
               134-322
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               135-272
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               136-225
               

               Cow position:
               
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-372
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               170, 87
               

               Conread position:
               136-396
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               166, 69
               

               Conread position:
               136-397
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               157, 24
               

               Conread position:
               137-293
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               137-392
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               137-397
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               137-397
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               169, 34
               

               Conread position:
               138-269
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               138-290
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               138-302
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               138-385
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               172, 85
               

               Conread position:
               138-389
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               144-277
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               144-367
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               160, 96
               

               Conread position:
               144-398
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 187
               

               Conread position:
               145-397
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               156, 61
               

               Conread position:
               154-381
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 123
               

               Conread position:
               154-418
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               152, 52
               

               Conread position:
               172-390
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               197, 5
               

               Conread position:
               181-397
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 83
               

               Conread position:
               204-397
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               208-391
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               221-401
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               223-389
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               226-397
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               228-398
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               230-396
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               76, 6
               

               Conread position:
               235-398
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               238-392
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 125
               

               Conread position:
               242-397
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 15
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               244-397
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               244-398
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               244-398
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               245-392
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               245-397
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               245-397
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               247-371
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               247-397
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 8
               

               Conread position:
               247-398
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               248-398
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               248-398
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               250-397
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 28
               

               Conread position:
               250-397
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 40
               

               Conread position:
               250-398
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               251-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 116
               

               Conread position:
               252-366
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               252-381
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               252-383
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               252-392
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               252-395
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               252-395
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               252-396
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 15
               

               Conread position:
               252-396
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               252-397
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               56, 122
               

               Conread position:
               252-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               252-399
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               253-371
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               253-397
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               253-398
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               253-398
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               254-384
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               254-397
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               254-400
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               256-392
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               256-395
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               117, 17
               

               Conread position:
               256-398
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               257-398
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               260-395
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               260-396
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               262-397
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               263-390
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               263-397
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 88
               

               Conread position:
               266-397
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               268-398
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               272-392
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               272-397
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               273-397
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               275-397
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               275-398
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               36, 6
               

               Conread position:
               289-397
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               289-397
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 68
               
Show alignments to all cow chromosomes.