Cow genome map
Conread name: | Ss1.1-Pig3-SRG8019N06.5 |
Conread position: | 131-397 |
Cow position: | chr20:34777478-34777210 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 192 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 174, 39 |
Conread position: | 135-395 |
Cow position: | chr20:7709504-7709749 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 196 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 171, 67 |
Conread position: | 135-395 |
Cow position: | chr20:33438705-33438948 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 192 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 13, 79 |
Conread position: | 136-272 |
Cow position: | chr20:35447662-35447801 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 136-347 |
Cow position: | chr20:24522590-24522378 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 145 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 166, 86 |
Conread position: | 136-395 |
Cow position: | chr20:20056209-20056455 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 201 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 233, 68 |
Conread position: | 138-397 |
Cow position: | chr20:9537412-9537169 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 185 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 45, 99 |
Conread position: | 143-395 |
Cow position: | chr20:13944039-13943797 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 189 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 108, 59 |
Conread position: | 144-266 |
Cow position: | chr20:30939302-30939178 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 144-334 |
Cow position: | chr20:18100864-18100677 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 148 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 78, 49 |
Conread position: | 144-398 |
Cow position: | chr20:31798926-31799174 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 171 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 162, 92 |
Conread position: | 145-397 |
Cow position: | chr20:6890980-6890744 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 227, 89 |
Conread position: | 148-354 |
Cow position: | chr20:36023123-36023326 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 150 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 157, 71 |
Conread position: | 153-392 |
Cow position: | chr20:17846229-17845996 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 180 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 27, 97 |
Conread position: | 172-398 |
Cow position: | chr20:13983620-13983385 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 173 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 177-389 |
Cow position: | chr20:32988573-32988792 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 34, 143 |
Conread position: | 193-392 |
Cow position: | chr20:14100197-14100398 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 108, 168 |
Conread position: | 200-367 |
Cow position: | chr20:15846986-15846816 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 25, 63 |
Conread position: | 200-396 |
Cow position: | chr20:16405840-16405643 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 142 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 67, 6 |
Conread position: | 206-367 |
Cow position: | chr20:41274671-41274837 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 132 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 212-396 |
Cow position: | chr20:35591432-35591618 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 149 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 93, 63 |
Conread position: | 216-367 |
Cow position: | chr20:26059013-26059169 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 216-392 |
Cow position: | chr20:11444292-11444114 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 133 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 40, 139 |
Conread position: | 222-381 |
Cow position: | chr20:7622778-7622937 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 80, 53 |
Conread position: | 225-397 |
Cow position: | chr20:35460334-35460512 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 58, 102 |
Conread position: | 238-396 |
Cow position: | chr20:580727-580889 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 241-398 |
Cow position: | chr20:34202826-34202663 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 128 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 243-395 |
Cow position: | chr20:35208017-35208174 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 54, 31 |
Conread position: | 244-384 |
Cow position: | chr20:9730180-9730041 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 33, 72 |
Conread position: | 244-395 |
Cow position: | chr20:23870632-23870786 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 244-397 |
Cow position: | chr20:12995816-12995975 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 88 |
Conread position: | 244-398 |
Cow position: | chr20:36779543-36779700 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 34 |
Conread position: | 245-386 |
Cow position: | chr20:2823056-2822913 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 61, 136 |
Conread position: | 245-397 |
Cow position: | chr20:11481949-11482104 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 113 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 246-397 |
Cow position: | chr20:40782143-40781991 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 60, 13 |
Conread position: | 247-395 |
Cow position: | chr20:20739103-20739252 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 58, 138 |
Conread position: | 247-397 |
Cow position: | chr20:16548095-16548248 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 125 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 59, 31 |
Conread position: | 247-397 |
Cow position: | chr20:23506290-23506440 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 126, 11 |
Conread position: | 248-372 |
Cow position: | chr20:5078454-5078327 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 60, 19 |
Conread position: | 248-390 |
Cow position: | chr20:28594470-28594323 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 58, 110 |
Conread position: | 248-391 |
Cow position: | chr20:23936002-23936148 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 60, 76 |
Conread position: | 248-397 |
Cow position: | chr20:7416984-7417137 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 249-382 |
Cow position: | chr20:2148011-2148147 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 57, 81 |
Conread position: | 249-395 |
Cow position: | chr20:6096313-6096463 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 249-397 |
Cow position: | chr20:40158082-40157930 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 250-391 |
Cow position: | chr20:34221658-34221515 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 250-397 |
Cow position: | chr20:4945074-4945221 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 56, 18 |
Conread position: | 250-397 |
Cow position: | chr20:12126125-12126274 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 56, 16 |
Conread position: | 250-397 |
Cow position: | chr20:29845231-29845081 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 56, 46 |
Conread position: | 252-365 |
Cow position: | chr20:17544803-17544687 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 252-395 |
Cow position: | chr20:6054330-6054477 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 252-395 |
Cow position: | chr20:10200525-10200378 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 252-396 |
Cow position: | chr20:24712020-24711871 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 252-396 |
Cow position: | chr20:34097774-34097925 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 122 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 252-397 |
Cow position: | chr20:20934558-20934702 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 56, 23 |
Conread position: | 252-397 |
Cow position: | chr20:39016693-39016844 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 252-398 |
Cow position: | chr20:6248422-6248572 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 111 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 252-398 |
Cow position: | chr20:39962754-39962604 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 110 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 253-397 |
Cow position: | chr20:354723-354867 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 57, 100 |
Conread position: | 253-397 |
Cow position: | chr20:19751483-19751337 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 253-397 |
Cow position: | chr20:23590571-23590717 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 53, 119 |
Conread position: | 254-397 |
Cow position: | chr20:3141750-3141604 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 56, 35 |
Conread position: | 254-397 |
Cow position: | chr20:14283099-14282950 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 255-397 |
Cow position: | chr20:22485036-22484892 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 19, 5 |
Conread position: | 255-398 |
Cow position: | chr20:38925674-38925822 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 256-384 |
Cow position: | chr20:35442107-35442239 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 256-392 |
Cow position: | chr20:11359458-11359596 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 50, 22 |
Conread position: | 256-397 |
Cow position: | chr20:16941115-16941257 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 120 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 50, 10 |
Conread position: | 257-397 |
Cow position: | chr20:20967495-20967351 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 257-397 |
Cow position: | chr20:21372482-21372338 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 257-397 |
Cow position: | chr20:35727756-35727900 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 258-397 |
Cow position: | chr20:361017-361156 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 48, 82 |
Conread position: | 258-397 |
Cow position: | chr20:21345606-21345459 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 260-386 |
Cow position: | chr20:31845114-31845244 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 260-390 |
Cow position: | chr20:39415921-39415787 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 260-397 |
Cow position: | chr20:13652196-13652337 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 263-397 |
Cow position: | chr20:11008338-11008200 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 264-401 |
Cow position: | chr20:4332300-4332156 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 267-385 |
Cow position: | chr20:2316261-2316383 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 267-397 |
Cow position: | chr20:5703636-5703501 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 270-397 |
Cow position: | chr20:16492234-16492102 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 272-393 |
Cow position: | chr20:22959189-22959313 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 36, 50 |
Conread position: | 272-395 |
Cow position: | chr20:17251876-17251750 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 107 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 35, 100 |
Conread position: | 275-397 |
Cow position: | chr20:31323943-31323818 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 31, 78 |
Conread position: | 278-397 |
Cow position: | chr20:9433740-9433617 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 281-401 |
Cow position: | chr20:5950493-5950617 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.