Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8019N06.5 |
| Conread position: | 105-395 |
| Cow position: | chr3:15173351-15173046 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 286 |
| Conread position: | 120-397 |
| Cow position: | chr3:57624703-57624427 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 125-322 |
| Cow position: | chr3:71489002-71488789 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 135-340 |
| Cow position: | chr3:62622971-62623175 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 88 |
| Conread position: | 135-371 |
| Cow position: | chr3:35285273-35285033 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 89 |
| Conread position: | 136-230 |
| Cow position: | chr3:24584969-24585063 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-234 |
| Cow position: | chr3:61466991-61467089 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-244 |
| Cow position: | chr3:57627659-57627551 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-266 |
| Cow position: | chr3:39909479-39909609 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-270 |
| Cow position: | chr3:54435147-54435015 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 136-348 |
| Cow position: | chr3:17447401-17447602 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 170, 70 |
| Conread position: | 136-370 |
| Cow position: | chr3:83504414-83504186 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 169, 78 |
| Conread position: | 136-397 |
| Cow position: | chr3:17934729-17934975 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 170, 25 |
| Conread position: | 136-397 |
| Cow position: | chr3:26230330-26230059 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 166, 30 |
| Conread position: | 136-398 |
| Cow position: | chr3:53508821-53508573 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 174, 98 |
| Conread position: | 136-398 |
| Cow position: | chr3:59621431-59621686 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 170, 70 |
| Conread position: | 137-397 |
| Cow position: | chr3:46901416-46901157 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 164, 81 |
| Conread position: | 137-398 |
| Cow position: | chr3:51604381-51604652 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 138-276 |
| Cow position: | chr3:44839079-44839216 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 138-347 |
| Cow position: | chr3:18426838-18427048 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 168, 68 |
| Conread position: | 138-397 |
| Cow position: | chr3:11606539-11606277 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 167, 79 |
| Conread position: | 139-365 |
| Cow position: | chr3:52634321-52634104 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 167, 81 |
| Conread position: | 139-382 |
| Cow position: | chr3:53256734-53256509 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 166, 86 |
| Conread position: | 141-397 |
| Cow position: | chr3:31850161-31850410 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 147, 90 |
| Conread position: | 143-272 |
| Cow position: | chr3:59147785-59147658 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 143-397 |
| Cow position: | chr3:57877773-57877529 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 162, 79 |
| Conread position: | 144-262 |
| Cow position: | chr3:75151215-75151333 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-347 |
| Cow position: | chr3:57038104-57038310 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 144-365 |
| Cow position: | chr3:27670644-27670409 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 144-370 |
| Cow position: | chr3:28555950-28556171 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 166, 69 |
| Conread position: | 144-381 |
| Cow position: | chr3:15682926-15683171 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 234 |
| Conread position: | 144-382 |
| Cow position: | chr3:78201818-78201588 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 161, 92 |
| Conread position: | 144-397 |
| Cow position: | chr3:81470894-81471133 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 162, 30 |
| Conread position: | 145-268 |
| Cow position: | chr3:49232054-49231930 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 145-398 |
| Cow position: | chr3:55271825-55272083 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 152-365 |
| Cow position: | chr3:68620717-68620927 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 154, 43 |
| Conread position: | 153-379 |
| Cow position: | chr3:26973230-26973458 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 150, 101 |
| Conread position: | 157-397 |
| Cow position: | chr3:64372936-64373193 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 205-392 |
| Cow position: | chr3:11705412-11705219 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 208-397 |
| Cow position: | chr3:28258248-28258058 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 210-397 |
| Cow position: | chr3:70402054-70401860 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 147 |
| Conread position: | 211-396 |
| Cow position: | chr3:26874742-26874560 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 95, 67 |
| Conread position: | 214-398 |
| Cow position: | chr3:66883794-66883978 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 221-371 |
| Cow position: | chr3:25702200-25702352 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 221-386 |
| Cow position: | chr3:46305593-46305434 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 148, 54 |
| Conread position: | 222-397 |
| Cow position: | chr3:21997648-21997825 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 224-392 |
| Cow position: | chr3:59630377-59630541 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 82, 51 |
| Conread position: | 224-401 |
| Cow position: | chr3:77006604-77006433 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 225-391 |
| Cow position: | chr3:49790674-49790843 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 229-387 |
| Cow position: | chr3:61467058-61467217 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 230-370 |
| Cow position: | chr3:61133772-61133629 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 233-395 |
| Cow position: | chr3:32457324-32457159 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 235-398 |
| Cow position: | chr3:66631223-66631390 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 236-408 |
| Cow position: | chr3:14263520-14263350 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 238-369 |
| Cow position: | chr3:4086741-4086872 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 238-391 |
| Cow position: | chr3:61279034-61278880 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 135 |
| Conread position: | 240-396 |
| Cow position: | chr3:30222314-30222154 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 240-397 |
| Cow position: | chr3:84175700-84175860 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 241-401 |
| Cow position: | chr3:54067916-54067756 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 242-398 |
| Cow position: | chr3:36914179-36914012 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 243-392 |
| Cow position: | chr3:59828272-59828425 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 243-396 |
| Cow position: | chr3:13301730-13301886 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 243-396 |
| Cow position: | chr3:56704200-56704357 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 244-392 |
| Cow position: | chr3:35299787-35299636 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 244-397 |
| Cow position: | chr3:54100606-54100763 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 244-398 |
| Cow position: | chr3:33329939-33329779 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 245-392 |
| Cow position: | chr3:5703292-5703146 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 127, 70 |
| Conread position: | 245-397 |
| Cow position: | chr3:51578208-51578360 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 128, 12 |
| Conread position: | 245-407 |
| Cow position: | chr3:8813993-8814160 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 246-357 |
| Cow position: | chr3:57067727-57067612 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 246-397 |
| Cow position: | chr3:2638042-2637889 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 246-397 |
| Cow position: | chr3:73820253-73820405 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 246-398 |
| Cow position: | chr3:51033482-51033328 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 246-401 |
| Cow position: | chr3:53318519-53318360 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 247-383 |
| Cow position: | chr3:38691289-38691429 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 247-397 |
| Cow position: | chr3:53046546-53046696 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 248-367 |
| Cow position: | chr3:62186267-62186145 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 248-397 |
| Cow position: | chr3:74900527-74900677 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 248-398 |
| Cow position: | chr3:83215378-83215224 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 249-395 |
| Cow position: | chr3:63269336-63269188 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 250-397 |
| Cow position: | chr3:4319826-4319674 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 250-398 |
| Cow position: | chr3:7581605-7581755 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 250-398 |
| Cow position: | chr3:15973679-15973528 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 251-383 |
| Cow position: | chr3:64010702-64010835 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 251-391 |
| Cow position: | chr3:11229252-11229396 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 251-397 |
| Cow position: | chr3:52863070-52863221 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 251-397 |
| Cow position: | chr3:55970619-55970470 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 251-397 |
| Cow position: | chr3:58317835-58317985 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 252-359 |
| Cow position: | chr3:17039726-17039614 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 252-367 |
| Cow position: | chr3:4167164-4167281 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 252-381 |
| Cow position: | chr3:18699999-18700132 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-381 |
| Cow position: | chr3:41366598-41366729 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 252-381 |
| Cow position: | chr3:59947777-59947644 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-381 |
| Cow position: | chr3:61023911-61024044 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-390 |
| Cow position: | chr3:53875653-53875795 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-391 |
| Cow position: | chr3:70756530-70756672 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 252-395 |
| Cow position: | chr3:9025974-9026119 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 252-396 |
| Cow position: | chr3:48900221-48900368 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 252-396 |
| Cow position: | chr3:75238569-75238421 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-397 |
| Cow position: | chr3:3656627-3656477 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 252-397 |
| Cow position: | chr3:15443617-15443765 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-397 |
| Cow position: | chr3:23203120-23203268 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 252-397 |
| Cow position: | chr3:27976413-27976561 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 252-397 |
| Cow position: | chr3:31309242-31309391 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 252-397 |
| Cow position: | chr3:53270942-53270793 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-397 |
| Cow position: | chr3:65058807-65058663 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 252-397 |
| Cow position: | chr3:70334583-70334732 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 252-397 |
| Cow position: | chr3:79271599-79271749 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-398 |
| Cow position: | chr3:5366880-5366731 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 252-398 |
| Cow position: | chr3:6728218-6728368 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-398 |
| Cow position: | chr3:9663060-9663210 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-398 |
| Cow position: | chr3:21014844-21014996 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-398 |
| Cow position: | chr3:38783717-38783568 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 252-398 |
| Cow position: | chr3:49482603-49482754 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 252-407 |
| Cow position: | chr3:3556657-3556499 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 149 |
| Conread position: | 253-367 |
| Cow position: | chr3:83199621-83199505 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 253-389 |
| Cow position: | chr3:65413166-65413307 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 253-398 |
| Cow position: | chr3:58134576-58134724 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 254-396 |
| Cow position: | chr3:35624436-35624581 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 254-397 |
| Cow position: | chr3:37041528-37041382 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 254-398 |
| Cow position: | chr3:53910218-53910071 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 255-388 |
| Cow position: | chr3:19793012-19792877 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 255-397 |
| Cow position: | chr3:23471351-23471496 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 255-398 |
| Cow position: | chr3:2518432-2518577 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 256-371 |
| Cow position: | chr3:59317809-59317692 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 256-396 |
| Cow position: | chr3:76267867-76268011 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 256-397 |
| Cow position: | chr3:20841767-20841910 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 256-398 |
| Cow position: | chr3:26982167-26982020 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 256-414 |
| Cow position: | chr3:28902653-28902811 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 257-397 |
| Cow position: | chr3:48252991-48252848 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 257-398 |
| Cow position: | chr3:14552980-14552837 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 257-464 |
| Cow position: | chr3:52457018-52456812 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 258-397 |
| Cow position: | chr3:15153797-15153654 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 260-384 |
| Cow position: | chr3:70402747-70402622 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 260-395 |
| Cow position: | chr3:56948984-56949123 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 260-396 |
| Cow position: | chr3:55712544-55712404 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 260-397 |
| Cow position: | chr3:24935468-24935328 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 260-397 |
| Cow position: | chr3:71423451-71423588 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 260-398 |
| Cow position: | chr3:21642091-21641950 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 260-398 |
| Cow position: | chr3:57577800-57577659 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 261-397 |
| Cow position: | chr3:41863728-41863587 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 261-397 |
| Cow position: | chr3:69650786-69650926 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 261-398 |
| Cow position: | chr3:46792488-46792347 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 262-397 |
| Cow position: | chr3:8393449-8393313 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 263-398 |
| Cow position: | chr3:56678249-56678389 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 264-397 |
| Cow position: | chr3:5365777-5365640 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 267-397 |
| Cow position: | chr3:1517415-1517549 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 268-398 |
| Cow position: | chr3:27696883-27697016 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 271-400 |
| Cow position: | chr3:39873603-39873733 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 272-397 |
| Cow position: | chr3:57760590-57760461 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 272-397 |
| Cow position: | chr3:84137723-84137852 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 273-397 |
| Cow position: | chr3:15228732-15228860 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 273-397 |
| Cow position: | chr3:22871759-22871880 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 273-397 |
| Cow position: | chr3:59000666-59000789 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 68 |
| Conread position: | 273-397 |
| Cow position: | chr3:73395207-73395080 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 273-407 |
| Cow position: | chr3:7566326-7566465 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 275-397 |
| Cow position: | chr3:51234007-51234131 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 275-397 |
| Cow position: | chr3:55819839-55819721 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 275-401 |
| Cow position: | chr3:18459439-18459569 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 278-397 |
| Cow position: | chr3:11292162-11292285 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 278-397 |
| Cow position: | chr3:34669647-34669764 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 289-397 |
| Cow position: | chr3:81277393-81277505 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.