Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8019N06.5 |
| Conread position: | 92-398 |
| Cow position: | chr4:19324254-19323953 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 212, 22 |
| Conread position: | 128-397 |
| Cow position: | chr4:19098710-19098449 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 36 |
| Conread position: | 130-387 |
| Cow position: | chr4:38886855-38887119 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 171 |
| Conread position: | 133-391 |
| Cow position: | chr4:21875033-21874788 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 173, 75 |
| Conread position: | 136-232 |
| Cow position: | chr4:19542345-19542249 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-254 |
| Cow position: | chr4:21801230-21801113 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 136-264 |
| Cow position: | chr4:49090297-49090167 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 136-378 |
| Cow position: | chr4:21532863-21533096 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 136-392 |
| Cow position: | chr4:3397190-3396957 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 229, 32 |
| Conread position: | 136-398 |
| Cow position: | chr4:12904056-12903799 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 231, 31 |
| Conread position: | 137-367 |
| Cow position: | chr4:11512491-11512698 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 137-371 |
| Cow position: | chr4:30792202-30791975 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 169, 53 |
| Conread position: | 137-375 |
| Cow position: | chr4:69398638-69398859 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 138-377 |
| Cow position: | chr4:13520641-13520878 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 168, 81 |
| Conread position: | 138-398 |
| Cow position: | chr4:43865638-43865875 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 139-391 |
| Cow position: | chr4:45367960-45367725 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 166, 35 |
| Conread position: | 140-367 |
| Cow position: | chr4:7729200-7729426 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 141-384 |
| Cow position: | chr4:1184947-1184702 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 118 |
| Conread position: | 142-246 |
| Cow position: | chr4:57421266-57421159 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 143-268 |
| Cow position: | chr4:28543122-28543246 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 144-260 |
| Cow position: | chr4:13211433-13211315 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 144-328 |
| Cow position: | chr4:59337496-59337328 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 164, 75 |
| Conread position: | 144-346 |
| Cow position: | chr4:16644901-16645101 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 158, 80 |
| Conread position: | 144-367 |
| Cow position: | chr4:32272734-32272962 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 72, 120 |
| Conread position: | 144-395 |
| Cow position: | chr4:54854576-54854823 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 161, 43 |
| Conread position: | 144-397 |
| Cow position: | chr4:21174072-21173825 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 76 |
| Conread position: | 144-397 |
| Cow position: | chr4:47349049-47348809 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 99 |
| Conread position: | 144-398 |
| Cow position: | chr4:8947609-8947375 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 229, 73 |
| Conread position: | 144-398 |
| Cow position: | chr4:63095842-63096095 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 164, 59 |
| Conread position: | 145-262 |
| Cow position: | chr4:52268109-52268224 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 149-257 |
| Cow position: | chr4:27755030-27755138 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-397 |
| Cow position: | chr4:65649900-65650150 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 103, 228 |
| Conread position: | 152-353 |
| Cow position: | chr4:46449937-46449725 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 152-395 |
| Cow position: | chr4:11380504-11380265 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 153, 54 |
| Conread position: | 154-396 |
| Cow position: | chr4:50675937-50676189 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 28, 208 |
| Conread position: | 177-397 |
| Cow position: | chr4:41300802-41301013 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 177-398 |
| Cow position: | chr4:58880766-58880982 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 131, 89 |
| Conread position: | 199-395 |
| Cow position: | chr4:65950834-65950637 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 76 |
| Conread position: | 202-397 |
| Cow position: | chr4:44782553-44782355 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 103, 165 |
| Conread position: | 205-367 |
| Cow position: | chr4:53833343-53833169 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 205-398 |
| Cow position: | chr4:19321897-19322099 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 212-397 |
| Cow position: | chr4:46702491-46702678 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 94, 66 |
| Conread position: | 214-398 |
| Cow position: | chr4:9815182-9815368 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 60 |
| Conread position: | 218-397 |
| Cow position: | chr4:54191252-54191070 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 221-371 |
| Cow position: | chr4:23808110-23807956 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 221-397 |
| Cow position: | chr4:45636328-45636146 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 230-401 |
| Cow position: | chr4:19304497-19304320 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 231-399 |
| Cow position: | chr4:2021-1849 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 236-397 |
| Cow position: | chr4:51920689-51920524 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 240-398 |
| Cow position: | chr4:48902484-48902646 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 241-386 |
| Cow position: | chr4:51708205-51708056 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 241-397 |
| Cow position: | chr4:38358686-38358841 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 243-390 |
| Cow position: | chr4:8083661-8083812 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 244-365 |
| Cow position: | chr4:30845508-30845384 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 244-370 |
| Cow position: | chr4:46761744-46761615 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 244-382 |
| Cow position: | chr4:65806032-65805890 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 244-384 |
| Cow position: | chr4:19561925-19561781 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 244-392 |
| Cow position: | chr4:47280264-47280114 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 244-395 |
| Cow position: | chr4:51784317-51784162 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 244-395 |
| Cow position: | chr4:61313076-61313231 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 244-396 |
| Cow position: | chr4:16762590-16762745 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 244-397 |
| Cow position: | chr4:20142775-20142926 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 244-397 |
| Cow position: | chr4:45909841-45909997 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 244-398 |
| Cow position: | chr4:18095536-18095689 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 245-369 |
| Cow position: | chr4:25802826-25802699 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 245-371 |
| Cow position: | chr4:54543527-54543657 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 245-395 |
| Cow position: | chr4:44613137-44612986 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 245-397 |
| Cow position: | chr4:19542268-19542118 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 118 |
| Conread position: | 246-397 |
| Cow position: | chr4:23444913-23445066 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 246-397 |
| Cow position: | chr4:27699165-27699012 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 5 |
| Conread position: | 246-397 |
| Cow position: | chr4:32726358-32726204 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 246-397 |
| Cow position: | chr4:45582988-45583139 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 113 |
| Conread position: | 246-398 |
| Cow position: | chr4:23526828-23526673 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 247-392 |
| Cow position: | chr4:53819552-53819701 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 247-397 |
| Cow position: | chr4:15462117-15462273 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 247-397 |
| Cow position: | chr4:22546711-22546861 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 248-376 |
| Cow position: | chr4:45483929-45483799 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 248-388 |
| Cow position: | chr4:10999582-10999726 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 248-392 |
| Cow position: | chr4:16814516-16814367 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 248-398 |
| Cow position: | chr4:12901425-12901579 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 249-398 |
| Cow position: | chr4:45874333-45874487 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 250-371 |
| Cow position: | chr4:41780108-41780232 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 250-388 |
| Cow position: | chr4:14512427-14512569 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 250-395 |
| Cow position: | chr4:45775207-45775356 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 250-397 |
| Cow position: | chr4:12004343-12004198 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 250-398 |
| Cow position: | chr4:17052462-17052614 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 251-393 |
| Cow position: | chr4:65265180-65265322 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 251-396 |
| Cow position: | chr4:508780-508928 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 251-397 |
| Cow position: | chr4:59378039-59377889 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 251-398 |
| Cow position: | chr4:570922-570771 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-383 |
| Cow position: | chr4:47230869-47231004 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-383 |
| Cow position: | chr4:47283884-47284019 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-395 |
| Cow position: | chr4:32561957-32561811 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 252-396 |
| Cow position: | chr4:28836663-28836517 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 252-397 |
| Cow position: | chr4:33181673-33181524 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-397 |
| Cow position: | chr4:34383213-34383361 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 111 |
| Conread position: | 252-397 |
| Cow position: | chr4:40995859-40995711 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 252-397 |
| Cow position: | chr4:44772914-44773063 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 252-397 |
| Cow position: | chr4:45837499-45837648 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 252-397 |
| Cow position: | chr4:45862540-45862397 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 121, 5 |
| Conread position: | 252-397 |
| Cow position: | chr4:46455940-46456085 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 252-398 |
| Cow position: | chr4:7847151-7847301 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 252-398 |
| Cow position: | chr4:22101136-22101286 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 252-398 |
| Cow position: | chr4:26959841-26959990 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 252-398 |
| Cow position: | chr4:45250099-45249949 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 252-398 |
| Cow position: | chr4:46883542-46883694 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 252-398 |
| Cow position: | chr4:47305206-47305056 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 252-406 |
| Cow position: | chr4:19199158-19199315 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 155 |
| Conread position: | 253-392 |
| Cow position: | chr4:19496624-19496479 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 253-396 |
| Cow position: | chr4:45563874-45563722 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 253-397 |
| Cow position: | chr4:19256817-19256675 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 253-397 |
| Cow position: | chr4:37675742-37675598 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 253-398 |
| Cow position: | chr4:19539109-19539258 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 254-397 |
| Cow position: | chr4:52779977-52779830 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 254-398 |
| Cow position: | chr4:47038894-47038746 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 255-396 |
| Cow position: | chr4:12135803-12135946 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 255-396 |
| Cow position: | chr4:12591088-12591233 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 256-380 |
| Cow position: | chr4:52823277-52823404 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 256-397 |
| Cow position: | chr4:32693913-32693767 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 256-398 |
| Cow position: | chr4:12127514-12127660 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 256-398 |
| Cow position: | chr4:22713369-22713514 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 260-387 |
| Cow position: | chr4:45261927-45262058 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 260-392 |
| Cow position: | chr4:61608844-61608980 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 260-397 |
| Cow position: | chr4:19456566-19456707 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 260-397 |
| Cow position: | chr4:20124845-20124988 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 260-397 |
| Cow position: | chr4:43542357-43542491 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 52 |
| Conread position: | 260-397 |
| Cow position: | chr4:45626507-45626647 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 260-397 |
| Cow position: | chr4:50687745-50687881 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 113, 55 |
| Conread position: | 261-395 |
| Cow position: | chr4:61346136-61346001 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 261-397 |
| Cow position: | chr4:45706158-45706023 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 262-398 |
| Cow position: | chr4:7698384-7698245 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 266-397 |
| Cow position: | chr4:65175030-65175165 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 270-397 |
| Cow position: | chr4:34369339-34369470 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 272-395 |
| Cow position: | chr4:10905361-10905482 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 272-396 |
| Cow position: | chr4:67393200-67393072 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 278-397 |
| Cow position: | chr4:5460759-5460881 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 293-397 |
| Cow position: | chr4:65432238-65432130 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.