Cow genome map

Conread name: Ss1.1-Pig3-SRG8019N06.5

Conread position: 92-398
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 212, 22

Conread position: 128-397
Cow position:
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 36

Conread position: 130-387
Cow position:
Alignm length: 267
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 171

Conread position: 133-391
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 173, 75

Conread position: 136-232
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 136-254
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 136-264
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 136-378
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 32

Conread position: 136-392
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 229, 32

Conread position: 136-398
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 231, 31

Conread position: 137-367
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 137-371
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 169, 53

Conread position: 137-375
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 138-377
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 168, 81

Conread position: 138-398
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 139-391
Cow position:
Alignm length: 257
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 166, 35

Conread position: 140-367
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 23

Conread position: 141-384
Cow position:
Alignm length: 248
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 85, 118

Conread position: 142-246
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 143-268
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 24

Conread position: 144-260
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 144-328
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 164, 75

Conread position: 144-346
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 158, 80

Conread position: 144-367
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 72, 120

Conread position: 144-395
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 161, 43

Conread position: 144-397
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 76

Conread position: 144-397
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 99

Conread position: 144-398
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 229, 73

Conread position: 144-398
Cow position:
Alignm length: 259
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 164, 59

Conread position: 145-262
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 149-257
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 151-397
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 103, 228

Conread position: 152-353
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 152-395
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 153, 54

Conread position: 154-396
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 28, 208

Conread position: 177-397
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 29

Conread position: 177-398
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 89

Conread position: 199-395
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 76

Conread position: 202-397
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 103, 165

Conread position: 205-367
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 205-398
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 212-397
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 66

Conread position: 214-398
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 60

Conread position: 218-397
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 37

Conread position: 221-371
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 221-397
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 230-401
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 231-399
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 236-397
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 240-398
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 241-386
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 241-397
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 11

Conread position: 243-390
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 15, 31

Conread position: 244-365
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 244-370
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 244-382
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 244-384
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 13

Conread position: 244-392
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 54

Conread position: 244-395
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 106

Conread position: 244-395
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 244-396
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 17

Conread position: 244-397
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 83

Conread position: 244-397
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 45

Conread position: 244-398
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 132

Conread position: 245-369
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 245-371
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 245-395
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 114, 56

Conread position: 245-397
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 118

Conread position: 246-397
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 32

Conread position: 246-397
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 5

Conread position: 246-397
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 22

Conread position: 246-397
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 113

Conread position: 246-398
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 247-392
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 247-397
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 247-397
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 28

Conread position: 248-376
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 19

Conread position: 248-388
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 31

Conread position: 248-392
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 248-398
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 249-398
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 250-371
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 250-388
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 250-395
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 250-397
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 16

Conread position: 250-398
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 251-393
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 26

Conread position: 251-396
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 27

Conread position: 251-397
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 251-398
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 252-383
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 252-383
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 252-395
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 30

Conread position: 252-396
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 111

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 101

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 252-397
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 5

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 107

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 30

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 252-398
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 252-406
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 155

Conread position: 253-392
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 253-396
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 253-397
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 25

Conread position: 253-397
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 108

Conread position: 253-398
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 254-397
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 13

Conread position: 254-398
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 255-396
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 20

Conread position: 255-396
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 256-380
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 256-397
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 256-398
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 256-398
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 76

Conread position: 260-387
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 260-392
Cow position:
Alignm length: 137
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 260-397
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 260-397
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 260-397
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 52

Conread position: 260-397
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 260-397
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 55

Conread position: 261-395
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 22

Conread position: 261-397
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 20

Conread position: 262-398
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 76

Conread position: 266-397
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 270-397
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 272-395
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 101, 45

Conread position: 272-396
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 278-397
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 11

Conread position: 293-397
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.