Cow genome map

Conread name: Ss1.1-Pig3-SRG8019N06.5

Conread position: 123-367
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 75

Conread position: 132-231
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 134-232
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 136-220
Cow position:
Alignm length: 85
Alignm identity: 77
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 136-258
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 136-266
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 136-395
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 152, 34

Conread position: 136-396
Cow position:
Alignm length: 277
Alignm identity: 182
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 137-348
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 30

Conread position: 138-342
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 20

Conread position: 138-365
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 172, 29

Conread position: 143-396
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 165, 24

Conread position: 144-380
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 224, 79

Conread position: 144-398
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 147

Conread position: 144-398
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 162, 62

Conread position: 145-356
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 153, 121

Conread position: 145-397
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 160, 75

Conread position: 146-386
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 71, 0

Conread position: 148-367
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 185, 127

Conread position: 172-339
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 34

Conread position: 177-386
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 33

Conread position: 199-397
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 99

Conread position: 200-397
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 79

Conread position: 205-371
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 61

Conread position: 213-398
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 221-381
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 25

Conread position: 222-396
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 21

Conread position: 222-398
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 51

Conread position: 223-397
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 23

Conread position: 224-386
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 52

Conread position: 224-397
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 42

Conread position: 224-397
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 226-397
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 23

Conread position: 226-397
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 56

Conread position: 226-398
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 14

Conread position: 227-397
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 62

Conread position: 228-396
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 16

Conread position: 235-398
Cow position:
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 237-397
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 24

Conread position: 243-397
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 243-398
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 244-396
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 46

Conread position: 244-397
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 244-397
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 244-401
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 245-392
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 245-397
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 246-392
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 28

Conread position: 246-397
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 247-397
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 126, 61

Conread position: 248-371
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 248-397
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 13

Conread position: 249-354
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 249-397
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 25

Conread position: 250-371
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 250-397
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 250-397
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 16

Conread position: 252-382
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 252-382
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 252-384
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 252-384
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 105

Conread position: 252-385
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 252-391
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 252-396
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 26

Conread position: 252-396
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 26

Conread position: 252-396
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 22

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 6

Conread position: 252-397
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 252-397
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 68, 22

Conread position: 252-397
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 120

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 252-398
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 26

Conread position: 253-398
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 253-398
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 253-398
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 254-398
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 126

Conread position: 255-397
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 256-396
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 22

Conread position: 256-397
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 256-397
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 22

Conread position: 256-397
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 106

Conread position: 256-398
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 256-398
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 129

Conread position: 257-396
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 258-384
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 258-397
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 258-397
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 258-397
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 96

Conread position: 260-379
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 260-392
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 23

Conread position: 260-393
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 260-397
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 260-397
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 21

Conread position: 261-389
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 261-397
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 261-397
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 98

Conread position: 262-396
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 262-398
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 28

Conread position: 263-392
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 78

Conread position: 264-397
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 266-379
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 109

Conread position: 266-397
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 40

Conread position: 266-397
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 85

Conread position: 267-397
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 271-397
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 91

Conread position: 272-396
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 278-397
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 282-397
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.