Cow genome map

Conread name: Ss1.1-Pig3-SRG8021B14.5

Conread position: 536-704
Cow position: chr14:41623128-41623298 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 11

Conread position: 540-669
Cow position: chr14:25517143-25517012 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 540-701
Cow position: chr14:33457244-33457068 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 5

Conread position: 540-708
Cow position: chr14:36443211-36443036 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 5

Conread position: 545-669
Cow position: chr14:13516178-13516057 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 545-676
Cow position: chr14:13176622-13176488 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 8

Conread position: 545-693
Cow position: chr14:6389078-6388918 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 59

Conread position: 545-708
Cow position: chr14:5044490-5044653 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 33

Conread position: 546-708
Cow position: chr14:23104189-23104016 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 549-708
Cow position: chr14:28304976-28304803 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 146

Conread position: 550-665
Cow position: chr14:40780690-40780575 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 553-669
Cow position: chr14:30050133-30050013 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 554-708
Cow position: chr14:24921916-24922082 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 555-651
Cow position: chr14:30431981-30431883 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 555-655
Cow position: chr14:21018599-21018700 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 555-668
Cow position: chr14:20640806-20640696 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 0

Conread position: 555-669
Cow position: chr14:11981286-11981399 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 0

Conread position: 555-669
Cow position: chr14:15944846-15944731 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 555-669
Cow position: chr14:26918815-26918928 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 555-669
Cow position: chr14:39097328-39097439 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 0

Conread position: 555-698
Cow position: chr14:37152115-37151967 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 27, 145

Conread position: 555-700
Cow position: chr14:12512072-12511922 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 103

Conread position: 555-700
Cow position: chr14:13809775-13809914 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 555-708
Cow position: chr14:109658-109508 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 83

Conread position: 555-708
Cow position: chr14:12244562-12244403 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 555-708
Cow position: chr14:20245344-20245187 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 23

Conread position: 555-708
Cow position: chr14:40754422-40754265 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 23

Conread position: 556-701
Cow position: chr14:18559238-18559086 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 556-708
Cow position: chr14:23442847-23443004 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 82

Conread position: 557-708
Cow position: chr14:36289971-36289816 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 119

Conread position: 558-669
Cow position: chr14:12081302-12081191 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 103

Conread position: 558-669
Cow position: chr14:42080095-42079981 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 559-669
Cow position: chr14:13006348-13006459 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 559-669
Cow position: chr14:18412769-18412659 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 559-669
Cow position: chr14:34330998-34330886 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 25, 0

Conread position: 560-669
Cow position: chr14:41755981-41756091 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 560-708
Cow position: chr14:21593175-21593021 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 101, 35

Conread position: 560-708
Cow position: chr14:21946213-21946374 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 561-667
Cow position: chr14:11470326-11470217 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 561-708
Cow position: chr14:8591020-8590866 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 561-708
Cow position: chr14:35421260-35421101 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 562-669
Cow position: chr14:23100439-23100547 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 33

Conread position: 562-675
Cow position: chr14:5634383-5634271 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 562-675
Cow position: chr14:31130551-31130437 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 91

Conread position: 562-700
Cow position: chr14:40806770-40806637 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 562-708
Cow position: chr14:23424092-23424243 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 76

Conread position: 562-708
Cow position: chr14:41267897-41267750 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 111

Conread position: 563-661
Cow position: chr14:26824851-26824751 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 17, 0

Conread position: 563-669
Cow position: chr14:26115886-26115994 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 563-669
Cow position: chr14:45955116-45955223 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 564-649
Cow position: chr14:36538047-36537961 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 565-669
Cow position: chr14:27364406-27364512 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 92
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 566-700
Cow position: chr14:10858272-10858407 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 79

Conread position: 567-669
Cow position: chr14:8923754-8923653 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 567-669
Cow position: chr14:38296366-38296263 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 567-699
Cow position: chr14:2975254-2975111 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 568-660
Cow position: chr14:44464994-44464905 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 14, 0

Conread position: 568-669
Cow position: chr14:27044958-27044854 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 568-700
Cow position: chr14:10721868-10721732 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 98, 0

Conread position: 571-669
Cow position: chr14:15518568-15518468 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 572-660
Cow position: chr14:5503660-5503572 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 574-708
Cow position: chr14:11079293-11079434 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 576-669
Cow position: chr14:7386711-7386618 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 576-669
Cow position: chr14:29592874-29592781 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 578-700
Cow position: chr14:35503207-35503334 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.