Cow genome map
Conread name: | Ss1.1-Pig3-SRG8021B14.5 |
Conread position: | 536-704 |
Cow position: | chr14:41623128-41623298 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 45, 11 |
Conread position: | 540-669 |
Cow position: | chr14:25517143-25517012 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 540-701 |
Cow position: | chr14:33457244-33457068 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 13, 5 |
Conread position: | 540-708 |
Cow position: | chr14:36443211-36443036 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 17, 5 |
Conread position: | 545-669 |
Cow position: | chr14:13516178-13516057 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 545-676 |
Cow position: | chr14:13176622-13176488 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 27, 8 |
Conread position: | 545-693 |
Cow position: | chr14:6389078-6388918 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 8, 59 |
Conread position: | 545-708 |
Cow position: | chr14:5044490-5044653 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 109, 33 |
Conread position: | 546-708 |
Cow position: | chr14:23104189-23104016 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 549-708 |
Cow position: | chr14:28304976-28304803 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 132 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 26, 146 |
Conread position: | 550-665 |
Cow position: | chr14:40780690-40780575 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 553-669 |
Cow position: | chr14:30050133-30050013 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 554-708 |
Cow position: | chr14:24921916-24922082 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 555-651 |
Cow position: | chr14:30431981-30431883 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 83 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-655 |
Cow position: | chr14:21018599-21018700 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-668 |
Cow position: | chr14:20640806-20640696 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 555-669 |
Cow position: | chr14:11981286-11981399 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 90 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 555-669 |
Cow position: | chr14:15944846-15944731 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 555-669 |
Cow position: | chr14:26918815-26918928 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 92 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 555-669 |
Cow position: | chr14:39097328-39097439 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 555-698 |
Cow position: | chr14:37152115-37151967 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 27, 145 |
Conread position: | 555-700 |
Cow position: | chr14:12512072-12511922 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 27, 103 |
Conread position: | 555-700 |
Cow position: | chr14:13809775-13809914 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 555-708 |
Cow position: | chr14:109658-109508 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 27, 83 |
Conread position: | 555-708 |
Cow position: | chr14:12244562-12244403 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-708 |
Cow position: | chr14:20245344-20245187 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 105, 23 |
Conread position: | 555-708 |
Cow position: | chr14:40754422-40754265 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 103, 23 |
Conread position: | 556-701 |
Cow position: | chr14:18559238-18559086 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 556-708 |
Cow position: | chr14:23442847-23443004 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 33, 82 |
Conread position: | 557-708 |
Cow position: | chr14:36289971-36289816 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 12, 119 |
Conread position: | 558-669 |
Cow position: | chr14:12081302-12081191 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 93, 103 |
Conread position: | 558-669 |
Cow position: | chr14:42080095-42079981 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 559-669 |
Cow position: | chr14:13006348-13006459 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 559-669 |
Cow position: | chr14:18412769-18412659 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 92 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 559-669 |
Cow position: | chr14:34330998-34330886 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 560-669 |
Cow position: | chr14:41755981-41756091 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 560-708 |
Cow position: | chr14:21593175-21593021 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 101, 35 |
Conread position: | 560-708 |
Cow position: | chr14:21946213-21946374 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 561-667 |
Cow position: | chr14:11470326-11470217 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 561-708 |
Cow position: | chr14:8591020-8590866 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 561-708 |
Cow position: | chr14:35421260-35421101 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 562-669 |
Cow position: | chr14:23100439-23100547 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 91 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 22, 33 |
Conread position: | 562-675 |
Cow position: | chr14:5634383-5634271 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 562-675 |
Cow position: | chr14:31130551-31130437 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 91 |
Conread position: | 562-700 |
Cow position: | chr14:40806770-40806637 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 562-708 |
Cow position: | chr14:23424092-23424243 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 76 |
Conread position: | 562-708 |
Cow position: | chr14:41267897-41267750 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 20, 111 |
Conread position: | 563-661 |
Cow position: | chr14:26824851-26824751 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 84 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 563-669 |
Cow position: | chr14:26115886-26115994 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 92 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 563-669 |
Cow position: | chr14:45955116-45955223 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 92 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 564-649 |
Cow position: | chr14:36538047-36537961 (view UCSC Genome Browser custom track) |
Alignm length: | 87 |
Alignm identity: | 77 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 565-669 |
Cow position: | chr14:27364406-27364512 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 92 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 566-700 |
Cow position: | chr14:10858272-10858407 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 110 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 94, 79 |
Conread position: | 567-669 |
Cow position: | chr14:8923754-8923653 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 567-669 |
Cow position: | chr14:38296366-38296263 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 567-699 |
Cow position: | chr14:2975254-2975111 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 568-660 |
Cow position: | chr14:44464994-44464905 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 80 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 568-669 |
Cow position: | chr14:27044958-27044854 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 90 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 568-700 |
Cow position: | chr14:10721868-10721732 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 571-669 |
Cow position: | chr14:15518568-15518468 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 88 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 572-660 |
Cow position: | chr14:5503660-5503572 (view UCSC Genome Browser custom track) |
Alignm length: | 89 |
Alignm identity: | 76 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 574-708 |
Cow position: | chr14:11079293-11079434 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 576-669 |
Cow position: | chr14:7386711-7386618 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 79 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 576-669 |
Cow position: | chr14:29592874-29592781 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 79 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 578-700 |
Cow position: | chr14:35503207-35503334 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.