Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021B14.5 |
| Conread position: | 518-661 |
| Cow position: | chr23:40494592-40494449 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 537-669 |
| Cow position: | chr23:15099679-15099816 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 542-708 |
| Cow position: | chr23:22205361-22205528 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 547-669 |
| Cow position: | chr23:41107788-41107909 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 547-708 |
| Cow position: | chr23:40348412-40348582 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 549-669 |
| Cow position: | chr23:30617241-30617366 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 551-671 |
| Cow position: | chr23:4003878-4003757 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 552-669 |
| Cow position: | chr23:27526813-27526696 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 552-701 |
| Cow position: | chr23:16447470-16447619 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 552-705 |
| Cow position: | chr23:3568337-3568493 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 553-708 |
| Cow position: | chr23:307683-307518 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 25 |
| Conread position: | 554-669 |
| Cow position: | chr23:35239577-35239463 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 554-708 |
| Cow position: | chr23:34264525-34264689 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 555-668 |
| Cow position: | chr23:2471229-2471116 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 555-669 |
| Cow position: | chr23:32621511-32621398 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 555-669 |
| Cow position: | chr23:40737792-40737905 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 555-671 |
| Cow position: | chr23:7856985-7856870 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 555-700 |
| Cow position: | chr23:1429611-1429755 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 555-700 |
| Cow position: | chr23:15286924-15287066 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 95 |
| Conread position: | 555-708 |
| Cow position: | chr23:4291580-4291417 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 556-658 |
| Cow position: | chr23:22550809-22550708 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 556-659 |
| Cow position: | chr23:13673789-13673893 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 557-669 |
| Cow position: | chr23:4416061-4416175 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 560-700 |
| Cow position: | chr23:24704502-24704361 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 77, 49 |
| Conread position: | 561-669 |
| Cow position: | chr23:10676074-10675964 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 561-669 |
| Cow position: | chr23:25726559-25726454 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 561-701 |
| Cow position: | chr23:11369438-11369296 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 561-708 |
| Cow position: | chr23:17462810-17462652 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 562-669 |
| Cow position: | chr23:799449-799556 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 562-708 |
| Cow position: | chr23:40081716-40081575 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 563-669 |
| Cow position: | chr23:1337089-1337197 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 563-669 |
| Cow position: | chr23:33434881-33434774 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 564-700 |
| Cow position: | chr23:17484643-17484776 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 564-700 |
| Cow position: | chr23:22704791-22704655 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 565-708 |
| Cow position: | chr23:3890356-3890512 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 566-708 |
| Cow position: | chr23:26975252-26975402 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 569-669 |
| Cow position: | chr23:3244705-3244805 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 571-708 |
| Cow position: | chr23:21423972-21423830 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 578-659 |
| Cow position: | chr23:24479722-24479803 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 74 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 578-700 |
| Cow position: | chr23:18710271-18710388 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 578-708 |
| Cow position: | chr23:13137738-13137873 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 578-708 |
| Cow position: | chr23:29345576-29345704 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 86, 94 |
| Conread position: | 580-669 |
| Cow position: | chr23:9726340-9726429 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 583-708 |
| Cow position: | chr23:18739265-18739401 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.