Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8021B14.5 |
| Conread position: | 513-700 |
| Cow position: | chr25:20019720-20019905 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 537-659 |
| Cow position: | chr25:36135879-36135999 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 543-659 |
| Cow position: | chr25:33839995-33839877 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 545-659 |
| Cow position: | chr25:14212596-14212711 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 547-701 |
| Cow position: | chr25:6190119-6190278 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 551-660 |
| Cow position: | chr25:17725260-17725149 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 551-701 |
| Cow position: | chr25:17119969-17119807 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 552-669 |
| Cow position: | chr25:22154254-22154136 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 553-659 |
| Cow position: | chr25:7012948-7012842 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 553-661 |
| Cow position: | chr25:20132879-20132990 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 553-700 |
| Cow position: | chr25:12755272-12755413 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 555-651 |
| Cow position: | chr25:12565168-12565267 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 555-669 |
| Cow position: | chr25:18201710-18201821 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 555-678 |
| Cow position: | chr25:19808295-19808415 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 555-700 |
| Cow position: | chr25:11957024-11956870 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 555-701 |
| Cow position: | chr25:20788608-20788758 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 556-704 |
| Cow position: | chr25:36370041-36369880 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 556-704 |
| Cow position: | chr25:36375732-36375571 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 557-708 |
| Cow position: | chr25:26224818-26224971 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 558-659 |
| Cow position: | chr25:22642490-22642388 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 558-660 |
| Cow position: | chr25:25026215-25026315 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 558-669 |
| Cow position: | chr25:19460292-19460181 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-700 |
| Cow position: | chr25:2195176-2195316 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 559-660 |
| Cow position: | chr25:26136604-26136706 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 559-701 |
| Cow position: | chr25:18760496-18760643 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 559-701 |
| Cow position: | chr25:28662324-28662175 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 562-669 |
| Cow position: | chr25:36121224-36121117 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 564-708 |
| Cow position: | chr25:33100783-33100633 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 565-708 |
| Cow position: | chr25:12223774-12223629 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 566-707 |
| Cow position: | chr25:28945224-28945079 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 566-708 |
| Cow position: | chr25:24863078-24862933 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 568-669 |
| Cow position: | chr25:5808156-5808053 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 569-660 |
| Cow position: | chr25:21048990-21049083 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 569-670 |
| Cow position: | chr25:18551127-18551229 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 569-708 |
| Cow position: | chr25:33663704-33663847 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 570-700 |
| Cow position: | chr25:28939933-28940075 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 573-668 |
| Cow position: | chr25:32666456-32666358 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 573-700 |
| Cow position: | chr25:21893535-21893404 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 578-708 |
| Cow position: | chr25:30462125-30462250 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 578-708 |
| Cow position: | chr25:33272834-33272691 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 580-701 |
| Cow position: | chr25:1763278-1763152 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 583-697 |
| Cow position: | chr25:36156002-36155886 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 90 |
| Conread position: | 588-701 |
| Cow position: | chr25:18646766-18646650 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 589-708 |
| Cow position: | chr25:18877419-18877537 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 606-708 |
| Cow position: | chr25:16065050-16064950 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.