Cow genome map

Conread name: Ss1.1-Pig3-SRG8021B14.5

Conread position: 543-708
Cow position: chr29:14747009-14746838 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 35

Conread position: 547-660
Cow position: chr29:28175888-28175771 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 548-660
Cow position: chr29:28616946-28616835 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 551-708
Cow position: chr29:14577082-14576917 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 551-708
Cow position: chr29:23678924-23678767 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 30

Conread position: 551-708
Cow position: chr29:35292306-35292151 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 108, 8

Conread position: 552-698
Cow position: chr29:23825882-23825741 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 553-669
Cow position: chr29:26777233-26777116 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 553-669
Cow position: chr29:38732377-38732261 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 553-672
Cow position: chr29:9800882-9800763 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 111

Conread position: 554-669
Cow position: chr29:23874685-23874568 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 555-698
Cow position: chr29:396624-396474 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 555-700
Cow position: chr29:22018964-22019121 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 555-701
Cow position: chr29:4647992-4648144 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 57

Conread position: 555-705
Cow position: chr29:20644139-20643976 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 49

Conread position: 555-706
Cow position: chr29:22720425-22720583 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 556-669
Cow position: chr29:34483405-34483519 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 558-669
Cow position: chr29:15947386-15947275 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 559-659
Cow position: chr29:35281689-35281588 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 559-669
Cow position: chr29:22068526-22068635 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 559-669
Cow position: chr29:28420972-28420863 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 559-708
Cow position: chr29:38754720-38754879 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 560-669
Cow position: chr29:32656653-32656542 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 561-700
Cow position: chr29:34359610-34359755 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 562-660
Cow position: chr29:33013813-33013715 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 562-694
Cow position: chr29:16657904-16657768 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 562-698
Cow position: chr29:18577655-18577514 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 562-708
Cow position: chr29:25975314-25975463 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 562-708
Cow position: chr29:26211268-26211110 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 563-660
Cow position: chr29:6716300-6716397 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 88
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 565-664
Cow position: chr29:31835478-31835380 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 565-666
Cow position: chr29:35485787-35485687 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 566-675
Cow position: chr29:4741177-4741289 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 567-700
Cow position: chr29:31982029-31981897 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 567-708
Cow position: chr29:14838598-14838743 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 567-708
Cow position: chr29:16290931-16290784 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 64

Conread position: 567-708
Cow position: chr29:24605106-24604954 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 572-701
Cow position: chr29:23698173-23698043 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 34

Conread position: 573-669
Cow position: chr29:17297340-17297244 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 85
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 574-701
Cow position: chr29:8841248-8841380 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 578-669
Cow position: chr29:9924376-9924467 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 578-699
Cow position: chr29:9149353-9149471 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 578-708
Cow position: chr29:5408945-5409083 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 579-669
Cow position: chr29:24187867-24187957 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 580-708
Cow position: chr29:3293138-3293006 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 586-696
Cow position: chr29:4423261-4423369 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 61

Show alignments to all cow chromosomes.