Cow genome map
Conread name: | Ss1.1-Pig3-SRG8021B14.5 |
Conread position: | 543-708 |
Cow position: | chr29:14747009-14746838 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 117, 35 |
Conread position: | 547-660 |
Cow position: | chr29:28175888-28175771 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 548-660 |
Cow position: | chr29:28616946-28616835 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 551-708 |
Cow position: | chr29:14577082-14576917 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 551-708 |
Cow position: | chr29:23678924-23678767 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 107, 30 |
Conread position: | 551-708 |
Cow position: | chr29:35292306-35292151 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 108, 8 |
Conread position: | 552-698 |
Cow position: | chr29:23825882-23825741 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 553-669 |
Cow position: | chr29:26777233-26777116 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 553-669 |
Cow position: | chr29:38732377-38732261 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 91 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 553-672 |
Cow position: | chr29:9800882-9800763 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 29, 111 |
Conread position: | 554-669 |
Cow position: | chr29:23874685-23874568 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 555-698 |
Cow position: | chr29:396624-396474 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 555-700 |
Cow position: | chr29:22018964-22019121 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-701 |
Cow position: | chr29:4647992-4648144 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 106, 57 |
Conread position: | 555-705 |
Cow position: | chr29:20644139-20643976 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 128 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 27, 49 |
Conread position: | 555-706 |
Cow position: | chr29:22720425-22720583 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 556-669 |
Cow position: | chr29:34483405-34483519 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 558-669 |
Cow position: | chr29:15947386-15947275 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 91 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 559-659 |
Cow position: | chr29:35281689-35281588 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 559-669 |
Cow position: | chr29:22068526-22068635 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 88 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 559-669 |
Cow position: | chr29:28420972-28420863 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 559-708 |
Cow position: | chr29:38754720-38754879 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 560-669 |
Cow position: | chr29:32656653-32656542 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 561-700 |
Cow position: | chr29:34359610-34359755 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 562-660 |
Cow position: | chr29:33013813-33013715 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 84 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 562-694 |
Cow position: | chr29:16657904-16657768 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 562-698 |
Cow position: | chr29:18577655-18577514 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 562-708 |
Cow position: | chr29:25975314-25975463 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 562-708 |
Cow position: | chr29:26211268-26211110 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 563-660 |
Cow position: | chr29:6716300-6716397 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 88 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 565-664 |
Cow position: | chr29:31835478-31835380 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 84 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 565-666 |
Cow position: | chr29:35485787-35485687 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 566-675 |
Cow position: | chr29:4741177-4741289 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 95 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 567-700 |
Cow position: | chr29:31982029-31981897 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 100 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 567-708 |
Cow position: | chr29:14838598-14838743 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 567-708 |
Cow position: | chr29:16290931-16290784 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 99, 64 |
Conread position: | 567-708 |
Cow position: | chr29:24605106-24604954 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 116 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 572-701 |
Cow position: | chr29:23698173-23698043 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 95, 34 |
Conread position: | 573-669 |
Cow position: | chr29:17297340-17297244 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 85 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 574-701 |
Cow position: | chr29:8841248-8841380 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 578-669 |
Cow position: | chr29:9924376-9924467 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 78 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 578-699 |
Cow position: | chr29:9149353-9149471 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 578-708 |
Cow position: | chr29:5408945-5409083 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 579-669 |
Cow position: | chr29:24187867-24187957 (view UCSC Genome Browser custom track) |
Alignm length: | 91 |
Alignm identity: | 77 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 580-708 |
Cow position: | chr29:3293138-3293006 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 586-696 |
Cow position: | chr29:4423261-4423369 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 61 |
Show alignments to all cow chromosomes.