Cow genome map
Conread name: | Ss1.1-Pig3-SRG8021B14.5 |
Conread position: | 1-563 |
Cow position: | chr3:50326019-50326580 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 334 |
Conread position: | 534-658 |
Cow position: | chr3:33285-33412 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 534-668 |
Cow position: | chr3:22165194-22165331 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 45, 12 |
Conread position: | 536-671 |
Cow position: | chr3:79398361-79398226 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 9, 24 |
Conread position: | 544-701 |
Cow position: | chr3:53836499-53836664 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 547-669 |
Cow position: | chr3:79893289-79893413 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 548-701 |
Cow position: | chr3:5823353-5823500 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 124, 30 |
Conread position: | 549-697 |
Cow position: | chr3:65237226-65237071 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 549-700 |
Cow position: | chr3:55271793-55271948 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 118 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 105, 27 |
Conread position: | 550-660 |
Cow position: | chr3:32689991-32690103 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 551-652 |
Cow position: | chr3:43727473-43727369 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 87 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 551-669 |
Cow position: | chr3:5703378-5703259 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 551-669 |
Cow position: | chr3:76300975-76300857 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 552-668 |
Cow position: | chr3:55318698-55318814 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 552-685 |
Cow position: | chr3:41746301-41746430 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 552-699 |
Cow position: | chr3:83491281-83491130 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 553-669 |
Cow position: | chr3:42933686-42933566 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 553-700 |
Cow position: | chr3:59605042-59604887 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 553-708 |
Cow position: | chr3:9662968-9663136 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 127 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 555-659 |
Cow position: | chr3:75151188-75151293 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 86 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-669 |
Cow position: | chr3:635373-635262 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 98 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 555-669 |
Cow position: | chr3:33460400-33460516 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-669 |
Cow position: | chr3:47735416-47735304 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-669 |
Cow position: | chr3:72910878-72910992 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 23, 5 |
Conread position: | 555-699 |
Cow position: | chr3:11608013-11607866 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 6, 28 |
Conread position: | 555-700 |
Cow position: | chr3:10591317-10591460 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 90, 28 |
Conread position: | 555-700 |
Cow position: | chr3:18831612-18831469 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 99, 23 |
Conread position: | 555-700 |
Cow position: | chr3:65058896-65058742 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 555-700 |
Cow position: | chr3:70402836-70402687 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 555-708 |
Cow position: | chr3:69849100-69849257 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 23, 105 |
Conread position: | 555-708 |
Cow position: | chr3:71238346-71238189 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 103, 33 |
Conread position: | 555-708 |
Cow position: | chr3:76168430-76168596 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 556-669 |
Cow position: | chr3:51150327-51150215 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 97 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 26, 43 |
Conread position: | 556-700 |
Cow position: | chr3:70333032-70333178 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 559-695 |
Cow position: | chr3:24584957-24585092 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 109, 23 |
Conread position: | 559-701 |
Cow position: | chr3:76056094-76056242 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 559-703 |
Cow position: | chr3:40794527-40794669 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 559-708 |
Cow position: | chr3:31489898-31489756 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 561-657 |
Cow position: | chr3:1452824-1452921 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 83 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 561-660 |
Cow position: | chr3:1011683-1011584 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 83 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 561-669 |
Cow position: | chr3:48468369-48468259 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 561-696 |
Cow position: | chr3:58562888-58562746 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 119 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 101, 23 |
Conread position: | 561-699 |
Cow position: | chr3:78071601-78071746 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 561-700 |
Cow position: | chr3:51608992-51609142 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 561-708 |
Cow position: | chr3:2016624-2016471 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 562-657 |
Cow position: | chr3:15973760-15973665 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 83 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 562-669 |
Cow position: | chr3:77188630-77188523 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 87 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 562-697 |
Cow position: | chr3:76270078-76269938 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 562-701 |
Cow position: | chr3:30180275-30180129 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 99 |
Conread position: | 562-708 |
Cow position: | chr3:67519986-67520130 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 120 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 562-708 |
Cow position: | chr3:83934916-83934761 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 563-669 |
Cow position: | chr3:43388934-43389043 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 92 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 563-708 |
Cow position: | chr3:40212844-40212998 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 564-659 |
Cow position: | chr3:78201837-78201740 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 87 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 18, 40 |
Conread position: | 564-700 |
Cow position: | chr3:3889389-3889524 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 564-700 |
Cow position: | chr3:53249669-53249532 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 102, 20 |
Conread position: | 564-700 |
Cow position: | chr3:72027829-72027680 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 564-708 |
Cow position: | chr3:53604554-53604710 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 566-669 |
Cow position: | chr3:80958322-80958426 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 87 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 566-708 |
Cow position: | chr3:20802454-20802595 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 117 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 567-660 |
Cow position: | chr3:11281956-11281861 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 82 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 567-708 |
Cow position: | chr3:15859194-15859343 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 15, 122 |
Conread position: | 568-669 |
Cow position: | chr3:29386055-29385951 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 89 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 568-675 |
Cow position: | chr3:19044583-19044691 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 568-700 |
Cow position: | chr3:58527563-58527426 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 14, 91 |
Conread position: | 568-708 |
Cow position: | chr3:28902578-28902723 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 569-660 |
Cow position: | chr3:55730281-55730374 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 81 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 569-708 |
Cow position: | chr3:3985500-3985358 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 569-708 |
Cow position: | chr3:18687080-18686942 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 75, 16 |
Conread position: | 570-657 |
Cow position: | chr3:70333787-70333874 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 570-669 |
Cow position: | chr3:10454028-10453927 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 86 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 570-700 |
Cow position: | chr3:27246785-27246915 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 94, 102 |
Conread position: | 570-708 |
Cow position: | chr3:23804684-23804541 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 82, 38 |
Conread position: | 576-700 |
Cow position: | chr3:15160693-15160564 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 578-660 |
Cow position: | chr3:68303492-68303410 (view UCSC Genome Browser custom track) |
Alignm length: | 83 |
Alignm identity: | 75 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 578-669 |
Cow position: | chr3:22078252-22078161 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 78 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 578-699 |
Cow position: | chr3:37641500-37641371 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 578-700 |
Cow position: | chr3:59681733-59681860 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 578-701 |
Cow position: | chr3:49787730-49787601 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 578-705 |
Cow position: | chr3:2648334-2648471 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 578-708 |
Cow position: | chr3:20996828-20996961 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 88, 81 |
Conread position: | 586-708 |
Cow position: | chr3:23753650-23753526 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 587-700 |
Cow position: | chr3:51233939-51234052 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 587-700 |
Cow position: | chr3:62312963-62312839 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 587-700 |
Cow position: | chr3:62370222-62370098 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 106 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 587-708 |
Cow position: | chr3:13329628-13329750 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 69, 90 |
Show alignments to all cow chromosomes.