Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021B14.5
        

               Conread position:
               541-708
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               541-708
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               543-701
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               547-705
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               548-700
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 30
               

               Conread position:
               549-669
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               551-669
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               552-669
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               552-685
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               552-706
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               27, 120
               

               Conread position:
               553-652
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               553-669
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               553-669
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               553-698
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               553-701
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               554-708
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               554-708
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-670
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-677
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               555-683
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               555-708
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               555-708
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               556-668
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               556-708
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               557-669
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               558-662
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               558-675
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               558-701
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               559-659
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               559-701
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               559-708
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               560-660
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               560-660
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               560-669
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               560-669
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               560-694
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               560-705
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               561-669
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-686
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               561-700
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 113
               

               Conread position:
               561-701
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               561-708
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-708
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               562-669
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               562-708
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               563-669
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               563-698
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               563-708
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               564-659
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               564-659
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-700
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 51
               

               Conread position:
               564-700
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               564-701
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               565-669
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-669
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-699
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 16
               

               Conread position:
               566-658
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-700
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               566-701
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               566-708
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               567-669
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-700
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               567-701
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               567-708
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               568-708
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               568-708
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               569-708
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               571-669
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               571-701
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               572-700
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               100, 126
               

               Conread position:
               576-669
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               576-708
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 130
               

               Conread position:
               578-669
               

               Cow position:
               
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-669
               

               Cow position:
               
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-700
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               578-701
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               578-708
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               578-708
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               580-706
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 0
               
Show alignments to all cow chromosomes.