Cow genome map

Conread name: Ss1.1-Pig3-SRG8021B14.5

Conread position: 501-648
Cow position: chr8:22914194-22914049 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 512-657
Cow position: chr8:35827532-35827671 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 528-667
Cow position: chr8:48436976-48437113 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 18

Conread position: 536-700
Cow position: chr8:54306607-54306433 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 540-708
Cow position: chr8:690037-690209 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 43

Conread position: 543-671
Cow position: chr8:52197210-52197340 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 543-700
Cow position: chr8:45149556-45149713 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 107

Conread position: 544-669
Cow position: chr8:6795629-6795505 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 11

Conread position: 544-708
Cow position: chr8:20783019-20783193 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 5

Conread position: 545-660
Cow position: chr8:38331311-38331194 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 545-708
Cow position: chr8:45664980-45664818 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 65

Conread position: 548-701
Cow position: chr8:6232662-6232814 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 7

Conread position: 550-708
Cow position: chr8:27731279-27731108 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 9

Conread position: 551-664
Cow position: chr8:48637631-48637518 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 551-669
Cow position: chr8:38641491-38641371 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 552-671
Cow position: chr8:59092648-59092767 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 553-668
Cow position: chr8:46543887-46544002 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 7

Conread position: 553-669
Cow position: chr8:12105782-12105668 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 553-669
Cow position: chr8:20105637-20105753 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 553-708
Cow position: chr8:9646764-9646614 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 554-669
Cow position: chr8:39352644-39352759 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-660
Cow position: chr8:28322208-28322100 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 555-660
Cow position: chr8:52870413-52870308 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-668
Cow position: chr8:6475309-6475423 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 555-669
Cow position: chr8:36771211-36771096 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 555-669
Cow position: chr8:48182738-48182622 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 555-700
Cow position: chr8:36375291-36375437 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 89, 32

Conread position: 555-701
Cow position: chr8:55454895-55454744 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 555-708
Cow position: chr8:37298708-37298548 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 22

Conread position: 555-708
Cow position: chr8:51160333-51160492 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 556-669
Cow position: chr8:53606285-53606400 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 556-704
Cow position: chr8:1188145-1187991 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 556-708
Cow position: chr8:43112621-43112775 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 27

Conread position: 557-669
Cow position: chr8:51524237-51524125 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 558-669
Cow position: chr8:20327618-20327734 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 558-697
Cow position: chr8:57389026-57388879 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 558-701
Cow position: chr8:19223432-19223581 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 558-708
Cow position: chr8:32243826-32243667 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 35

Conread position: 558-708
Cow position: chr8:47057435-47057593 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 20

Conread position: 559-685
Cow position: chr8:32260320-32260195 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 561-669
Cow position: chr8:55725538-55725648 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 561-700
Cow position: chr8:21776140-21776000 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 48

Conread position: 561-700
Cow position: chr8:46684650-46684509 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 561-708
Cow position: chr8:18870112-18869952 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 561-708
Cow position: chr8:31767814-31767964 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 21

Conread position: 562-684
Cow position: chr8:50770385-50770260 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 562-698
Cow position: chr8:60765990-60766125 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 44

Conread position: 562-708
Cow position: chr8:39116360-39116212 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 118

Conread position: 562-708
Cow position: chr8:39968054-39968211 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 563-669
Cow position: chr8:5385456-5385564 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 563-669
Cow position: chr8:25083402-25083295 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 563-669
Cow position: chr8:28382858-28382966 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 564-670
Cow position: chr8:4193312-4193423 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 565-669
Cow position: chr8:10194290-10194185 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 565-669
Cow position: chr8:26626093-26625989 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 565-669
Cow position: chr8:37683797-37683690 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 566-708
Cow position: chr8:24419064-24419206 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 88

Conread position: 567-676
Cow position: chr8:28412477-28412586 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 16

Conread position: 567-708
Cow position: chr8:1651814-1651661 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 568-669
Cow position: chr8:20112655-20112554 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 45

Conread position: 568-708
Cow position: chr8:61277947-61278091 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 14

Conread position: 569-669
Cow position: chr8:36054384-36054283 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 572-700
Cow position: chr8:37443738-37443608 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 102

Conread position: 572-701
Cow position: chr8:12058941-12058800 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 574-684
Cow position: chr8:23370107-23370215 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 578-699
Cow position: chr8:11216649-11216775 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 578-700
Cow position: chr8:19785067-19784937 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 578-700
Cow position: chr8:38711796-38711672 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 578-701
Cow position: chr8:8850425-8850552 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 578-708
Cow position: chr8:28228448-28228316 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 36

Conread position: 578-708
Cow position: chr8:46952726-46952586 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 583-701
Cow position: chr8:20030451-20030332 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.